Gene : Cagra.5494s0003 C. grandiflora v1.1
Defline:  (1 of 9) PF05703 - Auxin canalisation (Auxin_canalis) Genomic Order:  3
Name:  ? Cagra.5494s0003 Secondary Identifier:  ? PAC:28906020
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5494s0003 0.5kb upstream 0.5kb upstream 2812 true Scaffold5494: 5446-8257 Capsella grandiflora
Cagra.5494s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5494: 7758-8257 Capsella grandiflora
Cagra.5494s0003 0.5kb downstream 0.5kb downstream 2812 true Scaffold5494: 4946-7757 Capsella grandiflora
Cagra.5494s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5494: 4946-5445 Capsella grandiflora
Cagra.5494s0003 1.0kb upstream 1.0kb upstream 3312 true Scaffold5494: 5446-8757 Capsella grandiflora
Cagra.5494s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5494: 7758-8757 Capsella grandiflora
Cagra.5494s0003 1.0kb downstream 1.0kb downstream 3312 true Scaffold5494: 4446-7757 Capsella grandiflora
Cagra.5494s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5494: 4446-5445 Capsella grandiflora
Cagra.5494s0003 2.0kb upstream 2.0kb upstream 4312 true Scaffold5494: 5446-9757 Capsella grandiflora
Cagra.5494s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5494: 7758-9757 Capsella grandiflora
Cagra.5494s0003 2.0kb downstream 2.0kb downstream 4312 true Scaffold5494: 3446-7757 Capsella grandiflora
Cagra.5494s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5494: 3446-5445 Capsella grandiflora
Cagra.5494s0003 5.0kb upstream 5.0kb upstream 7312 true Scaffold5494: 5446-12757 Capsella grandiflora
Cagra.5494s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5494: 7758-12757 Capsella grandiflora
Cagra.5494s0003 5.0kb downstream 5.0kb downstream 7312 true Scaffold5494: 446-7757 Capsella grandiflora
Cagra.5494s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5494: 446-5445 Capsella grandiflora
Cagra.5494s0003 10.0kb upstream 10.0kb upstream 12312 true Scaffold5494: 5446-17757 Capsella grandiflora
Cagra.5494s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold5494: 7758-17757 Capsella grandiflora
Cagra.5494s0003 10.0kb downstream 10.0kb downstream 7757 true Scaffold5494: 1-7757 Capsella grandiflora
Cagra.5494s0003 10.0kb downstream 10.0kb downstream 5445 false Scaffold5494: 1-5445 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378833 5261 Brassicaceae View MSA
123802008 5264 Brassicales-Malvales View MSA
124299238 5266 SBM View MSA
124150706 5268 Malvidae View MSA
123876273 5270 Rosid View MSA
123459967 5271 Pentapetalae View MSA
122495348 5272 Eudicot View MSA
122048590 5273 Angiosperm View MSA
121311030 5274 Embryophyte View MSA
123348384 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain