Gene : Cagra.7286s0010 C. grandiflora v1.1
Defline:  (1 of 6) PF04884 - Vitamin B6 photo-protection and homoeostasis (DUF647) Genomic Order:  10
Name:  ? Cagra.7286s0010 Secondary Identifier:  ? PAC:28900182
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7286s0010 0.5kb upstream 0.5kb upstream 3211 true Scaffold7286: 36938-40148 Capsella grandiflora
Cagra.7286s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold7286: 39649-40148 Capsella grandiflora
Cagra.7286s0010 0.5kb downstream 0.5kb downstream 3211 true Scaffold7286: 36438-39648 Capsella grandiflora
Cagra.7286s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold7286: 36438-36937 Capsella grandiflora
Cagra.7286s0010 1.0kb upstream 1.0kb upstream 3711 true Scaffold7286: 36938-40648 Capsella grandiflora
Cagra.7286s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold7286: 39649-40648 Capsella grandiflora
Cagra.7286s0010 1.0kb downstream 1.0kb downstream 3711 true Scaffold7286: 35938-39648 Capsella grandiflora
Cagra.7286s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold7286: 35938-36937 Capsella grandiflora
Cagra.7286s0010 2.0kb upstream 2.0kb upstream 4711 true Scaffold7286: 36938-41648 Capsella grandiflora
Cagra.7286s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold7286: 39649-41648 Capsella grandiflora
Cagra.7286s0010 2.0kb downstream 2.0kb downstream 4711 true Scaffold7286: 34938-39648 Capsella grandiflora
Cagra.7286s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold7286: 34938-36937 Capsella grandiflora
Cagra.7286s0010 5.0kb upstream 5.0kb upstream 7711 true Scaffold7286: 36938-44648 Capsella grandiflora
Cagra.7286s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold7286: 39649-44648 Capsella grandiflora
Cagra.7286s0010 5.0kb downstream 5.0kb downstream 7711 true Scaffold7286: 31938-39648 Capsella grandiflora
Cagra.7286s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold7286: 31938-36937 Capsella grandiflora
Cagra.7286s0010 10.0kb upstream 10.0kb upstream 10640 true Scaffold7286: 36938-47577 Capsella grandiflora
Cagra.7286s0010 10.0kb upstream 10.0kb upstream 7929 false Scaffold7286: 39649-47577 Capsella grandiflora
Cagra.7286s0010 10.0kb downstream 10.0kb downstream 12711 true Scaffold7286: 26938-39648 Capsella grandiflora
Cagra.7286s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold7286: 26938-36937 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378685 5261 Brassicaceae View MSA
123835880 5264 Brassicales-Malvales View MSA
124347706 5266 SBM View MSA
124239801 5268 Malvidae View MSA
124063079 5270 Rosid View MSA
123739166 5271 Pentapetalae View MSA
122791185 5272 Eudicot View MSA
122047870 5273 Angiosperm View MSA
121346132 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain