Gene : Cagra.7355s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23346:SF7 - TRANSLATIONAL ACTIVATOR GCN1 Genomic Order:  3
Name:  ? Cagra.7355s0003 Secondary Identifier:  ? PAC:28918528
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7355s0003 0.5kb upstream 0.5kb upstream 17329 true Scaffold7355: 11359-28687 Capsella grandiflora
Cagra.7355s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold7355: 28188-28687 Capsella grandiflora
Cagra.7355s0003 0.5kb downstream 0.5kb downstream 17329 true Scaffold7355: 10859-28187 Capsella grandiflora
Cagra.7355s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold7355: 10859-11358 Capsella grandiflora
Cagra.7355s0003 1.0kb upstream 1.0kb upstream 17829 true Scaffold7355: 11359-29187 Capsella grandiflora
Cagra.7355s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold7355: 28188-29187 Capsella grandiflora
Cagra.7355s0003 1.0kb downstream 1.0kb downstream 17829 true Scaffold7355: 10359-28187 Capsella grandiflora
Cagra.7355s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold7355: 10359-11358 Capsella grandiflora
Cagra.7355s0003 2.0kb upstream 2.0kb upstream 18829 true Scaffold7355: 11359-30187 Capsella grandiflora
Cagra.7355s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold7355: 28188-30187 Capsella grandiflora
Cagra.7355s0003 2.0kb downstream 2.0kb downstream 18829 true Scaffold7355: 9359-28187 Capsella grandiflora
Cagra.7355s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold7355: 9359-11358 Capsella grandiflora
Cagra.7355s0003 5.0kb upstream 5.0kb upstream 21829 true Scaffold7355: 11359-33187 Capsella grandiflora
Cagra.7355s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold7355: 28188-33187 Capsella grandiflora
Cagra.7355s0003 5.0kb downstream 5.0kb downstream 21829 true Scaffold7355: 6359-28187 Capsella grandiflora
Cagra.7355s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold7355: 6359-11358 Capsella grandiflora
Cagra.7355s0003 10.0kb upstream 10.0kb upstream 26829 true Scaffold7355: 11359-38187 Capsella grandiflora
Cagra.7355s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold7355: 28188-38187 Capsella grandiflora
Cagra.7355s0003 10.0kb downstream 10.0kb downstream 26829 true Scaffold7355: 1359-28187 Capsella grandiflora
Cagra.7355s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold7355: 1359-11358 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364243 5261 Brassicaceae View MSA
123827781 5264 Brassicales-Malvales View MSA
124336706 5266 SBM View MSA
124241738 5268 Malvidae View MSA
124050351 5270 Rosid View MSA
123740065 5271 Pentapetalae View MSA
122789609 5272 Eudicot View MSA
122050896 5273 Angiosperm View MSA
121346458 5274 Embryophyte View MSA
123425740 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain