Gene : Cagra.7365s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10773 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 Genomic Order:  3
Name:  ? Cagra.7365s0003 Secondary Identifier:  ? PAC:28895714
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7365s0003 0.5kb upstream 0.5kb upstream 1673 true Scaffold7365: 10627-12299 Capsella grandiflora
Cagra.7365s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold7365: 11800-12299 Capsella grandiflora
Cagra.7365s0003 0.5kb downstream 0.5kb downstream 1673 true Scaffold7365: 10127-11799 Capsella grandiflora
Cagra.7365s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold7365: 10127-10626 Capsella grandiflora
Cagra.7365s0003 1.0kb upstream 1.0kb upstream 2173 true Scaffold7365: 10627-12799 Capsella grandiflora
Cagra.7365s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold7365: 11800-12799 Capsella grandiflora
Cagra.7365s0003 1.0kb downstream 1.0kb downstream 2173 true Scaffold7365: 9627-11799 Capsella grandiflora
Cagra.7365s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold7365: 9627-10626 Capsella grandiflora
Cagra.7365s0003 2.0kb upstream 2.0kb upstream 3173 true Scaffold7365: 10627-13799 Capsella grandiflora
Cagra.7365s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold7365: 11800-13799 Capsella grandiflora
Cagra.7365s0003 2.0kb downstream 2.0kb downstream 3173 true Scaffold7365: 8627-11799 Capsella grandiflora
Cagra.7365s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold7365: 8627-10626 Capsella grandiflora
Cagra.7365s0003 5.0kb upstream 5.0kb upstream 6173 true Scaffold7365: 10627-16799 Capsella grandiflora
Cagra.7365s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold7365: 11800-16799 Capsella grandiflora
Cagra.7365s0003 5.0kb downstream 5.0kb downstream 6173 true Scaffold7365: 5627-11799 Capsella grandiflora
Cagra.7365s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold7365: 5627-10626 Capsella grandiflora
Cagra.7365s0003 10.0kb upstream 10.0kb upstream 11173 true Scaffold7365: 10627-21799 Capsella grandiflora
Cagra.7365s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold7365: 11800-21799 Capsella grandiflora
Cagra.7365s0003 10.0kb downstream 10.0kb downstream 11173 true Scaffold7365: 627-11799 Capsella grandiflora
Cagra.7365s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold7365: 627-10626 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381205 5261 Brassicaceae View MSA
123838516 5264 Brassicales-Malvales View MSA
124346128 5266 SBM View MSA
124239845 5268 Malvidae View MSA
124071266 5270 Rosid View MSA
123737177 5271 Pentapetalae View MSA
122793068 5272 Eudicot View MSA
122041807 5273 Angiosperm View MSA
121346108 5274 Embryophyte View MSA
123427545 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain