Gene : Cagra.7250s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13405:SF11 - NUCLEAR PORE COMPLEX PROTEIN NUP133 Genomic Order:  4
Name:  ? Cagra.7250s0004 Secondary Identifier:  ? PAC:28902199
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7250s0004 0.5kb upstream 0.5kb upstream 5457 true Scaffold7250: 6945-12401 Capsella grandiflora
Cagra.7250s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold7250: 11902-12401 Capsella grandiflora
Cagra.7250s0004 0.5kb downstream 0.5kb downstream 5457 true Scaffold7250: 6445-11901 Capsella grandiflora
Cagra.7250s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold7250: 6445-6944 Capsella grandiflora
Cagra.7250s0004 1.0kb upstream 1.0kb upstream 5957 true Scaffold7250: 6945-12901 Capsella grandiflora
Cagra.7250s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold7250: 11902-12901 Capsella grandiflora
Cagra.7250s0004 1.0kb downstream 1.0kb downstream 5957 true Scaffold7250: 5945-11901 Capsella grandiflora
Cagra.7250s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold7250: 5945-6944 Capsella grandiflora
Cagra.7250s0004 2.0kb upstream 2.0kb upstream 6957 true Scaffold7250: 6945-13901 Capsella grandiflora
Cagra.7250s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold7250: 11902-13901 Capsella grandiflora
Cagra.7250s0004 2.0kb downstream 2.0kb downstream 6957 true Scaffold7250: 4945-11901 Capsella grandiflora
Cagra.7250s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold7250: 4945-6944 Capsella grandiflora
Cagra.7250s0004 5.0kb upstream 5.0kb upstream 9957 true Scaffold7250: 6945-16901 Capsella grandiflora
Cagra.7250s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold7250: 11902-16901 Capsella grandiflora
Cagra.7250s0004 5.0kb downstream 5.0kb downstream 9957 true Scaffold7250: 1945-11901 Capsella grandiflora
Cagra.7250s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold7250: 1945-6944 Capsella grandiflora
Cagra.7250s0004 10.0kb upstream 10.0kb upstream 14957 true Scaffold7250: 6945-21901 Capsella grandiflora
Cagra.7250s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold7250: 11902-21901 Capsella grandiflora
Cagra.7250s0004 10.0kb downstream 10.0kb downstream 11901 true Scaffold7250: 1-11901 Capsella grandiflora
Cagra.7250s0004 10.0kb downstream 10.0kb downstream 6944 false Scaffold7250: 1-6944 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372288 5261 Brassicaceae View MSA
123830399 5264 Brassicales-Malvales View MSA
124343300 5266 SBM View MSA
124240914 5268 Malvidae View MSA
124065950 5270 Rosid View MSA
123739362 5271 Pentapetalae View MSA
122792648 5272 Eudicot View MSA
122045150 5273 Angiosperm View MSA
121345241 5274 Embryophyte View MSA
123424593 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain