Gene : Cagra.7250s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21649//PTHR21649:SF8 - CHLOROPHYLL A/B BINDING PROTEIN Genomic Order:  3
Name:  ? Cagra.7250s0003 Secondary Identifier:  ? PAC:28902194
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7250s0003 0.5kb upstream 0.5kb upstream 1547 true Scaffold7250: 5359-6905 Capsella grandiflora
Cagra.7250s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold7250: 6406-6905 Capsella grandiflora
Cagra.7250s0003 0.5kb downstream 0.5kb downstream 1547 true Scaffold7250: 4859-6405 Capsella grandiflora
Cagra.7250s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold7250: 4859-5358 Capsella grandiflora
Cagra.7250s0003 1.0kb upstream 1.0kb upstream 2047 true Scaffold7250: 5359-7405 Capsella grandiflora
Cagra.7250s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold7250: 6406-7405 Capsella grandiflora
Cagra.7250s0003 1.0kb downstream 1.0kb downstream 2047 true Scaffold7250: 4359-6405 Capsella grandiflora
Cagra.7250s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold7250: 4359-5358 Capsella grandiflora
Cagra.7250s0003 2.0kb upstream 2.0kb upstream 3047 true Scaffold7250: 5359-8405 Capsella grandiflora
Cagra.7250s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold7250: 6406-8405 Capsella grandiflora
Cagra.7250s0003 2.0kb downstream 2.0kb downstream 3047 true Scaffold7250: 3359-6405 Capsella grandiflora
Cagra.7250s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold7250: 3359-5358 Capsella grandiflora
Cagra.7250s0003 5.0kb upstream 5.0kb upstream 6047 true Scaffold7250: 5359-11405 Capsella grandiflora
Cagra.7250s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold7250: 6406-11405 Capsella grandiflora
Cagra.7250s0003 5.0kb downstream 5.0kb downstream 6047 true Scaffold7250: 359-6405 Capsella grandiflora
Cagra.7250s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold7250: 359-5358 Capsella grandiflora
Cagra.7250s0003 10.0kb upstream 10.0kb upstream 11047 true Scaffold7250: 5359-16405 Capsella grandiflora
Cagra.7250s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold7250: 6406-16405 Capsella grandiflora
Cagra.7250s0003 10.0kb downstream 10.0kb downstream 6405 true Scaffold7250: 1-6405 Capsella grandiflora
Cagra.7250s0003 10.0kb downstream 10.0kb downstream 5358 false Scaffold7250: 1-5358 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041019 5273 Angiosperm View MSA
122380433 5261 Brassicaceae View MSA
123832323 5264 Brassicales-Malvales View MSA
124343907 5266 SBM View MSA
124251420 5268 Malvidae View MSA
124062505 5270 Rosid View MSA
123749191 5271 Pentapetalae View MSA
122791500 5272 Eudicot View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain