Gene : Cagra.7254s0005 C. grandiflora v1.1
Defline:  (1 of 33) PF03000 - NPH3 family (NPH3) Genomic Order:  5
Name:  ? Cagra.7254s0005 Secondary Identifier:  ? PAC:28904707
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7254s0005 0.5kb upstream 0.5kb upstream 6317 true Scaffold7254: 19801-26117 Capsella grandiflora
Cagra.7254s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold7254: 19801-20300 Capsella grandiflora
Cagra.7254s0005 0.5kb downstream 0.5kb downstream 6317 true Scaffold7254: 20301-26617 Capsella grandiflora
Cagra.7254s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold7254: 26118-26617 Capsella grandiflora
Cagra.7254s0005 1.0kb upstream 1.0kb upstream 6817 true Scaffold7254: 19301-26117 Capsella grandiflora
Cagra.7254s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold7254: 19301-20300 Capsella grandiflora
Cagra.7254s0005 1.0kb downstream 1.0kb downstream 6817 true Scaffold7254: 20301-27117 Capsella grandiflora
Cagra.7254s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold7254: 26118-27117 Capsella grandiflora
Cagra.7254s0005 2.0kb upstream 2.0kb upstream 7817 true Scaffold7254: 18301-26117 Capsella grandiflora
Cagra.7254s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold7254: 18301-20300 Capsella grandiflora
Cagra.7254s0005 2.0kb downstream 2.0kb downstream 7817 true Scaffold7254: 20301-28117 Capsella grandiflora
Cagra.7254s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold7254: 26118-28117 Capsella grandiflora
Cagra.7254s0005 5.0kb upstream 5.0kb upstream 10817 true Scaffold7254: 15301-26117 Capsella grandiflora
Cagra.7254s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold7254: 15301-20300 Capsella grandiflora
Cagra.7254s0005 5.0kb downstream 5.0kb downstream 10817 true Scaffold7254: 20301-31117 Capsella grandiflora
Cagra.7254s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold7254: 26118-31117 Capsella grandiflora
Cagra.7254s0005 10.0kb upstream 10.0kb upstream 15817 true Scaffold7254: 10301-26117 Capsella grandiflora
Cagra.7254s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold7254: 10301-20300 Capsella grandiflora
Cagra.7254s0005 10.0kb downstream 10.0kb downstream 15817 true Scaffold7254: 20301-36117 Capsella grandiflora
Cagra.7254s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold7254: 26118-36117 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373683 5261 Brassicaceae View MSA
123832427 5264 Brassicales-Malvales View MSA
124343318 5266 SBM View MSA
124236995 5268 Malvidae View MSA
124063063 5270 Rosid View MSA
123741197 5271 Pentapetalae View MSA
122790545 5272 Eudicot View MSA
122042377 5273 Angiosperm View MSA
121350883 5274 Embryophyte View MSA
123381921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain