Gene : Cagra.7254s0003 C. grandiflora v1.1
Defline:  (1 of 6) 2.4.1.144 - Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase / acetylglucosaminyltransferase III Genomic Order:  3
Name:  ? Cagra.7254s0003 Secondary Identifier:  ? PAC:28904697
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7426 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7254s0003 0.5kb upstream 0.5kb upstream 2392 true Scaffold7254: 9477-11868 Capsella grandiflora
Cagra.7254s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold7254: 11369-11868 Capsella grandiflora
Cagra.7254s0003 0.5kb downstream 0.5kb downstream 2392 true Scaffold7254: 8977-11368 Capsella grandiflora
Cagra.7254s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold7254: 8977-9476 Capsella grandiflora
Cagra.7254s0003 1.0kb upstream 1.0kb upstream 2892 true Scaffold7254: 9477-12368 Capsella grandiflora
Cagra.7254s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold7254: 11369-12368 Capsella grandiflora
Cagra.7254s0003 1.0kb downstream 1.0kb downstream 2892 true Scaffold7254: 8477-11368 Capsella grandiflora
Cagra.7254s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold7254: 8477-9476 Capsella grandiflora
Cagra.7254s0003 2.0kb upstream 2.0kb upstream 3892 true Scaffold7254: 9477-13368 Capsella grandiflora
Cagra.7254s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold7254: 11369-13368 Capsella grandiflora
Cagra.7254s0003 2.0kb downstream 2.0kb downstream 3892 true Scaffold7254: 7477-11368 Capsella grandiflora
Cagra.7254s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold7254: 7477-9476 Capsella grandiflora
Cagra.7254s0003 5.0kb upstream 5.0kb upstream 6892 true Scaffold7254: 9477-16368 Capsella grandiflora
Cagra.7254s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold7254: 11369-16368 Capsella grandiflora
Cagra.7254s0003 5.0kb downstream 5.0kb downstream 6892 true Scaffold7254: 4477-11368 Capsella grandiflora
Cagra.7254s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold7254: 4477-9476 Capsella grandiflora
Cagra.7254s0003 10.0kb upstream 10.0kb upstream 11892 true Scaffold7254: 9477-21368 Capsella grandiflora
Cagra.7254s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold7254: 11369-21368 Capsella grandiflora
Cagra.7254s0003 10.0kb downstream 10.0kb downstream 11368 true Scaffold7254: 1-11368 Capsella grandiflora
Cagra.7254s0003 10.0kb downstream 10.0kb downstream 9476 false Scaffold7254: 1-9476 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366215 5261 Brassicaceae View MSA
123836858 5264 Brassicales-Malvales View MSA
124342015 5266 SBM View MSA
124239256 5268 Malvidae View MSA
124074833 5270 Rosid View MSA
123745147 5271 Pentapetalae View MSA
122787351 5272 Eudicot View MSA
122044255 5273 Angiosperm View MSA
121351107 5274 Embryophyte View MSA
123424609 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain