Gene : Cagra.7254s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15362:SF4 - CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE Genomic Order:  13
Name:  ? Cagra.7254s0013 Secondary Identifier:  ? PAC:28904702
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  
Cgrandiflora PWY-7625 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7254s0013 0.5kb upstream 0.5kb upstream 2616 true Scaffold7254: 46319-48934 Capsella grandiflora
Cagra.7254s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold7254: 46319-46818 Capsella grandiflora
Cagra.7254s0013 0.5kb downstream 0.5kb downstream 2616 true Scaffold7254: 46819-49434 Capsella grandiflora
Cagra.7254s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold7254: 48935-49434 Capsella grandiflora
Cagra.7254s0013 1.0kb upstream 1.0kb upstream 3116 true Scaffold7254: 45819-48934 Capsella grandiflora
Cagra.7254s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold7254: 45819-46818 Capsella grandiflora
Cagra.7254s0013 1.0kb downstream 1.0kb downstream 3116 true Scaffold7254: 46819-49934 Capsella grandiflora
Cagra.7254s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold7254: 48935-49934 Capsella grandiflora
Cagra.7254s0013 2.0kb upstream 2.0kb upstream 4116 true Scaffold7254: 44819-48934 Capsella grandiflora
Cagra.7254s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold7254: 44819-46818 Capsella grandiflora
Cagra.7254s0013 2.0kb downstream 2.0kb downstream 4116 true Scaffold7254: 46819-50934 Capsella grandiflora
Cagra.7254s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold7254: 48935-50934 Capsella grandiflora
Cagra.7254s0013 5.0kb upstream 5.0kb upstream 7116 true Scaffold7254: 41819-48934 Capsella grandiflora
Cagra.7254s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold7254: 41819-46818 Capsella grandiflora
Cagra.7254s0013 5.0kb downstream 5.0kb downstream 7116 true Scaffold7254: 46819-53934 Capsella grandiflora
Cagra.7254s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold7254: 48935-53934 Capsella grandiflora
Cagra.7254s0013 10.0kb upstream 10.0kb upstream 12116 true Scaffold7254: 36819-48934 Capsella grandiflora
Cagra.7254s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold7254: 36819-46818 Capsella grandiflora
Cagra.7254s0013 10.0kb downstream 10.0kb downstream 12116 true Scaffold7254: 46819-58934 Capsella grandiflora
Cagra.7254s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold7254: 48935-58934 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368141 5261 Brassicaceae View MSA
123837573 5264 Brassicales-Malvales View MSA
124322337 5266 SBM View MSA
124237971 5268 Malvidae View MSA
124074338 5270 Rosid View MSA
123738044 5271 Pentapetalae View MSA
122788491 5272 Eudicot View MSA
122046136 5273 Angiosperm View MSA
121345622 5274 Embryophyte View MSA
123428790 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain