Gene : Cagra.6981s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23354:SF67 - TLD-DOMAIN CONTAINING NUCLEOLAR PROTEIN Genomic Order:  3
Name:  ? Cagra.6981s0003 Secondary Identifier:  ? PAC:28897053
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6981s0003 0.5kb upstream 0.5kb upstream 3119 true Scaffold6981: 3803-6921 Capsella grandiflora
Cagra.6981s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold6981: 6422-6921 Capsella grandiflora
Cagra.6981s0003 0.5kb downstream 0.5kb downstream 3119 true Scaffold6981: 3303-6421 Capsella grandiflora
Cagra.6981s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold6981: 3303-3802 Capsella grandiflora
Cagra.6981s0003 1.0kb upstream 1.0kb upstream 3619 true Scaffold6981: 3803-7421 Capsella grandiflora
Cagra.6981s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold6981: 6422-7421 Capsella grandiflora
Cagra.6981s0003 1.0kb downstream 1.0kb downstream 3619 true Scaffold6981: 2803-6421 Capsella grandiflora
Cagra.6981s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold6981: 2803-3802 Capsella grandiflora
Cagra.6981s0003 2.0kb upstream 2.0kb upstream 4619 true Scaffold6981: 3803-8421 Capsella grandiflora
Cagra.6981s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold6981: 6422-8421 Capsella grandiflora
Cagra.6981s0003 2.0kb downstream 2.0kb downstream 4619 true Scaffold6981: 1803-6421 Capsella grandiflora
Cagra.6981s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold6981: 1803-3802 Capsella grandiflora
Cagra.6981s0003 5.0kb upstream 5.0kb upstream 7619 true Scaffold6981: 3803-11421 Capsella grandiflora
Cagra.6981s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold6981: 6422-11421 Capsella grandiflora
Cagra.6981s0003 5.0kb downstream 5.0kb downstream 6421 true Scaffold6981: 1-6421 Capsella grandiflora
Cagra.6981s0003 5.0kb downstream 5.0kb downstream 3802 false Scaffold6981: 1-3802 Capsella grandiflora
Cagra.6981s0003 10.0kb upstream 10.0kb upstream 12619 true Scaffold6981: 3803-16421 Capsella grandiflora
Cagra.6981s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold6981: 6422-16421 Capsella grandiflora
Cagra.6981s0003 10.0kb downstream 10.0kb downstream 6421 true Scaffold6981: 1-6421 Capsella grandiflora
Cagra.6981s0003 10.0kb downstream 10.0kb downstream 3802 false Scaffold6981: 1-3802 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365221 5261 Brassicaceae View MSA
123827897 5264 Brassicales-Malvales View MSA
124338011 5266 SBM View MSA
124236976 5268 Malvidae View MSA
124061375 5270 Rosid View MSA
123739747 5271 Pentapetalae View MSA
122789164 5272 Eudicot View MSA
122042380 5273 Angiosperm View MSA
121345600 5274 Embryophyte View MSA
123380242 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain