Gene : Cagra.7035s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Genomic Order:  2
Name:  ? Cagra.7035s0002 Secondary Identifier:  ? PAC:28896247
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7035s0002 0.5kb upstream 0.5kb upstream 1867 true Scaffold7035: 1093-2959 Capsella grandiflora
Cagra.7035s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold7035: 1093-1592 Capsella grandiflora
Cagra.7035s0002 0.5kb downstream 0.5kb downstream 1867 true Scaffold7035: 1593-3459 Capsella grandiflora
Cagra.7035s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold7035: 2960-3459 Capsella grandiflora
Cagra.7035s0002 1.0kb upstream 1.0kb upstream 2367 true Scaffold7035: 593-2959 Capsella grandiflora
Cagra.7035s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold7035: 593-1592 Capsella grandiflora
Cagra.7035s0002 1.0kb downstream 1.0kb downstream 2367 true Scaffold7035: 1593-3959 Capsella grandiflora
Cagra.7035s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold7035: 2960-3959 Capsella grandiflora
Cagra.7035s0002 2.0kb upstream 2.0kb upstream 2959 true Scaffold7035: 1-2959 Capsella grandiflora
Cagra.7035s0002 2.0kb upstream 2.0kb upstream 1592 false Scaffold7035: 1-1592 Capsella grandiflora
Cagra.7035s0002 2.0kb downstream 2.0kb downstream 3367 true Scaffold7035: 1593-4959 Capsella grandiflora
Cagra.7035s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold7035: 2960-4959 Capsella grandiflora
Cagra.7035s0002 5.0kb upstream 5.0kb upstream 2959 true Scaffold7035: 1-2959 Capsella grandiflora
Cagra.7035s0002 5.0kb upstream 5.0kb upstream 1592 false Scaffold7035: 1-1592 Capsella grandiflora
Cagra.7035s0002 5.0kb downstream 5.0kb downstream 6367 true Scaffold7035: 1593-7959 Capsella grandiflora
Cagra.7035s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold7035: 2960-7959 Capsella grandiflora
Cagra.7035s0002 10.0kb upstream 10.0kb upstream 2959 true Scaffold7035: 1-2959 Capsella grandiflora
Cagra.7035s0002 10.0kb upstream 10.0kb upstream 1592 false Scaffold7035: 1-1592 Capsella grandiflora
Cagra.7035s0002 10.0kb downstream 10.0kb downstream 11367 true Scaffold7035: 1593-12959 Capsella grandiflora
Cagra.7035s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold7035: 2960-12959 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375303 5261 Brassicaceae View MSA
123836082 5264 Brassicales-Malvales View MSA
124337299 5266 SBM View MSA
124238755 5268 Malvidae View MSA
124073246 5270 Rosid View MSA
123747312 5271 Pentapetalae View MSA
122796946 5272 Eudicot View MSA
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain