Gene : Cagra.7055s0004 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31636:SF38 - SCARECROW-LIKE PROTEIN 21-RELATED Genomic Order:  4
Name:  ? Cagra.7055s0004 Secondary Identifier:  ? PAC:28902055
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7055s0004 0.5kb upstream 0.5kb upstream 2936 true Scaffold7055: 14596-17531 Capsella grandiflora
Cagra.7055s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold7055: 14596-15095 Capsella grandiflora
Cagra.7055s0004 0.5kb downstream 0.5kb downstream 2936 true Scaffold7055: 15096-18031 Capsella grandiflora
Cagra.7055s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold7055: 17532-18031 Capsella grandiflora
Cagra.7055s0004 1.0kb upstream 1.0kb upstream 3436 true Scaffold7055: 14096-17531 Capsella grandiflora
Cagra.7055s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold7055: 14096-15095 Capsella grandiflora
Cagra.7055s0004 1.0kb downstream 1.0kb downstream 3436 true Scaffold7055: 15096-18531 Capsella grandiflora
Cagra.7055s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold7055: 17532-18531 Capsella grandiflora
Cagra.7055s0004 2.0kb upstream 2.0kb upstream 4436 true Scaffold7055: 13096-17531 Capsella grandiflora
Cagra.7055s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold7055: 13096-15095 Capsella grandiflora
Cagra.7055s0004 2.0kb downstream 2.0kb downstream 4436 true Scaffold7055: 15096-19531 Capsella grandiflora
Cagra.7055s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold7055: 17532-19531 Capsella grandiflora
Cagra.7055s0004 5.0kb upstream 5.0kb upstream 7436 true Scaffold7055: 10096-17531 Capsella grandiflora
Cagra.7055s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold7055: 10096-15095 Capsella grandiflora
Cagra.7055s0004 5.0kb downstream 5.0kb downstream 7436 true Scaffold7055: 15096-22531 Capsella grandiflora
Cagra.7055s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold7055: 17532-22531 Capsella grandiflora
Cagra.7055s0004 10.0kb upstream 10.0kb upstream 12436 true Scaffold7055: 5096-17531 Capsella grandiflora
Cagra.7055s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold7055: 5096-15095 Capsella grandiflora
Cagra.7055s0004 10.0kb downstream 10.0kb downstream 12436 true Scaffold7055: 15096-27531 Capsella grandiflora
Cagra.7055s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold7055: 17532-27531 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372024 5261 Brassicaceae View MSA
123836526 5264 Brassicales-Malvales View MSA
124338887 5266 SBM View MSA
124244603 5268 Malvidae View MSA
124073750 5270 Rosid View MSA
123752771 5271 Pentapetalae View MSA
122794202 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain