Gene : Cagra.7084s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10210:SF54 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1, CHLOROPLASTIC-RELATED Genomic Order:  1
Name:  ? Cagra.7084s0001 Secondary Identifier:  ? PAC:28906457
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY0-662 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7084s0001 0.5kb upstream 0.5kb upstream 2608 true Scaffold7084: 1368-3975 Capsella grandiflora
Cagra.7084s0001 0.5kb upstream 0.5kb upstream 294 false Scaffold7084: 3682-3975 Capsella grandiflora
Cagra.7084s0001 0.5kb downstream 0.5kb downstream 2814 true Scaffold7084: 868-3681 Capsella grandiflora
Cagra.7084s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold7084: 868-1367 Capsella grandiflora
Cagra.7084s0001 1.0kb upstream 1.0kb upstream 2608 true Scaffold7084: 1368-3975 Capsella grandiflora
Cagra.7084s0001 1.0kb upstream 1.0kb upstream 294 false Scaffold7084: 3682-3975 Capsella grandiflora
Cagra.7084s0001 1.0kb downstream 1.0kb downstream 3314 true Scaffold7084: 368-3681 Capsella grandiflora
Cagra.7084s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold7084: 368-1367 Capsella grandiflora
Cagra.7084s0001 2.0kb upstream 2.0kb upstream 2608 true Scaffold7084: 1368-3975 Capsella grandiflora
Cagra.7084s0001 2.0kb upstream 2.0kb upstream 294 false Scaffold7084: 3682-3975 Capsella grandiflora
Cagra.7084s0001 2.0kb downstream 2.0kb downstream 3681 true Scaffold7084: 1-3681 Capsella grandiflora
Cagra.7084s0001 2.0kb downstream 2.0kb downstream 1367 false Scaffold7084: 1-1367 Capsella grandiflora
Cagra.7084s0001 5.0kb upstream 5.0kb upstream 2608 true Scaffold7084: 1368-3975 Capsella grandiflora
Cagra.7084s0001 5.0kb upstream 5.0kb upstream 294 false Scaffold7084: 3682-3975 Capsella grandiflora
Cagra.7084s0001 5.0kb downstream 5.0kb downstream 3681 true Scaffold7084: 1-3681 Capsella grandiflora
Cagra.7084s0001 5.0kb downstream 5.0kb downstream 1367 false Scaffold7084: 1-1367 Capsella grandiflora
Cagra.7084s0001 10.0kb upstream 10.0kb upstream 2608 true Scaffold7084: 1368-3975 Capsella grandiflora
Cagra.7084s0001 10.0kb upstream 10.0kb upstream 294 false Scaffold7084: 3682-3975 Capsella grandiflora
Cagra.7084s0001 10.0kb downstream 10.0kb downstream 3681 true Scaffold7084: 1-3681 Capsella grandiflora
Cagra.7084s0001 10.0kb downstream 10.0kb downstream 1367 false Scaffold7084: 1-1367 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371401 5261 Brassicaceae View MSA
123839095 5264 Brassicales-Malvales View MSA
124346548 5266 SBM View MSA
124240392 5268 Malvidae View MSA
124060795 5270 Rosid View MSA
123749025 5271 Pentapetalae View MSA
122788028 5272 Eudicot View MSA
122042217 5273 Angiosperm View MSA
121347994 5274 Embryophyte View MSA
123427852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain