Gene : Cagra.7094s0007 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11062:SF108 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  7
Name:  ? Cagra.7094s0007 Secondary Identifier:  ? PAC:28897995
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5980 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7094s0007 0.5kb upstream 0.5kb upstream 3163 true Scaffold7094: 29436-32598 Capsella grandiflora
Cagra.7094s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold7094: 32099-32598 Capsella grandiflora
Cagra.7094s0007 0.5kb downstream 0.5kb downstream 3163 true Scaffold7094: 28936-32098 Capsella grandiflora
Cagra.7094s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold7094: 28936-29435 Capsella grandiflora
Cagra.7094s0007 1.0kb upstream 1.0kb upstream 3663 true Scaffold7094: 29436-33098 Capsella grandiflora
Cagra.7094s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold7094: 32099-33098 Capsella grandiflora
Cagra.7094s0007 1.0kb downstream 1.0kb downstream 3663 true Scaffold7094: 28436-32098 Capsella grandiflora
Cagra.7094s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold7094: 28436-29435 Capsella grandiflora
Cagra.7094s0007 2.0kb upstream 2.0kb upstream 4663 true Scaffold7094: 29436-34098 Capsella grandiflora
Cagra.7094s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold7094: 32099-34098 Capsella grandiflora
Cagra.7094s0007 2.0kb downstream 2.0kb downstream 4663 true Scaffold7094: 27436-32098 Capsella grandiflora
Cagra.7094s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold7094: 27436-29435 Capsella grandiflora
Cagra.7094s0007 5.0kb upstream 5.0kb upstream 7663 true Scaffold7094: 29436-37098 Capsella grandiflora
Cagra.7094s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold7094: 32099-37098 Capsella grandiflora
Cagra.7094s0007 5.0kb downstream 5.0kb downstream 7663 true Scaffold7094: 24436-32098 Capsella grandiflora
Cagra.7094s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold7094: 24436-29435 Capsella grandiflora
Cagra.7094s0007 10.0kb upstream 10.0kb upstream 12663 true Scaffold7094: 29436-42098 Capsella grandiflora
Cagra.7094s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold7094: 32099-42098 Capsella grandiflora
Cagra.7094s0007 10.0kb downstream 10.0kb downstream 12663 true Scaffold7094: 19436-32098 Capsella grandiflora
Cagra.7094s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold7094: 19436-29435 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792376 5273 Angiosperm View MSA
122378938 5261 Brassicaceae View MSA
123802041 5264 Brassicales-Malvales View MSA
124299266 5266 SBM View MSA
124251013 5268 Malvidae View MSA
124067296 5270 Rosid View MSA
123744502 5271 Pentapetalae View MSA
122797581 5272 Eudicot View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain