Gene : Cagra.7094s0017 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23406:SF31 - NADP-DEPENDENT MALIC ENZYME 2-RELATED Genomic Order:  17
Name:  ? Cagra.7094s0017 Secondary Identifier:  ? PAC:28898017
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora GLUCONEO-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-241 Capsella grandiflora pathologic  
Cgrandiflora PWY-7117 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7094s0017 0.5kb upstream 0.5kb upstream 4451 true Scaffold7094: 60172-64622 Capsella grandiflora
Cagra.7094s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold7094: 60172-60671 Capsella grandiflora
Cagra.7094s0017 0.5kb downstream 0.5kb downstream 4451 true Scaffold7094: 60672-65122 Capsella grandiflora
Cagra.7094s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold7094: 64623-65122 Capsella grandiflora
Cagra.7094s0017 1.0kb upstream 1.0kb upstream 4951 true Scaffold7094: 59672-64622 Capsella grandiflora
Cagra.7094s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold7094: 59672-60671 Capsella grandiflora
Cagra.7094s0017 1.0kb downstream 1.0kb downstream 4951 true Scaffold7094: 60672-65622 Capsella grandiflora
Cagra.7094s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold7094: 64623-65622 Capsella grandiflora
Cagra.7094s0017 2.0kb upstream 2.0kb upstream 5951 true Scaffold7094: 58672-64622 Capsella grandiflora
Cagra.7094s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold7094: 58672-60671 Capsella grandiflora
Cagra.7094s0017 2.0kb downstream 2.0kb downstream 5951 true Scaffold7094: 60672-66622 Capsella grandiflora
Cagra.7094s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold7094: 64623-66622 Capsella grandiflora
Cagra.7094s0017 5.0kb upstream 5.0kb upstream 8951 true Scaffold7094: 55672-64622 Capsella grandiflora
Cagra.7094s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold7094: 55672-60671 Capsella grandiflora
Cagra.7094s0017 5.0kb downstream 5.0kb downstream 8951 true Scaffold7094: 60672-69622 Capsella grandiflora
Cagra.7094s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold7094: 64623-69622 Capsella grandiflora
Cagra.7094s0017 10.0kb upstream 10.0kb upstream 13951 true Scaffold7094: 50672-64622 Capsella grandiflora
Cagra.7094s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold7094: 50672-60671 Capsella grandiflora
Cagra.7094s0017 10.0kb downstream 10.0kb downstream 13951 true Scaffold7094: 60672-74622 Capsella grandiflora
Cagra.7094s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold7094: 64623-74622 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380041 5261 Brassicaceae View MSA
123837048 5264 Brassicales-Malvales View MSA
124345373 5266 SBM View MSA
124247919 5268 Malvidae View MSA
124068705 5270 Rosid View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain