Gene : Cagra.6845s0073 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12975 - TRANSPORT PROTEIN TRAPP Genomic Order:  73
Name:  ? Cagra.6845s0073 Secondary Identifier:  ? PAC:28894110
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6845s0073 0.5kb upstream 0.5kb upstream 8952 true Scaffold6845: 260676-269627 Capsella grandiflora
Cagra.6845s0073 0.5kb upstream 0.5kb upstream 500 false Scaffold6845: 269128-269627 Capsella grandiflora
Cagra.6845s0073 0.5kb downstream 0.5kb downstream 8952 true Scaffold6845: 260176-269127 Capsella grandiflora
Cagra.6845s0073 0.5kb downstream 0.5kb downstream 500 false Scaffold6845: 260176-260675 Capsella grandiflora
Cagra.6845s0073 1.0kb upstream 1.0kb upstream 9452 true Scaffold6845: 260676-270127 Capsella grandiflora
Cagra.6845s0073 1.0kb upstream 1.0kb upstream 1000 false Scaffold6845: 269128-270127 Capsella grandiflora
Cagra.6845s0073 1.0kb downstream 1.0kb downstream 9452 true Scaffold6845: 259676-269127 Capsella grandiflora
Cagra.6845s0073 1.0kb downstream 1.0kb downstream 1000 false Scaffold6845: 259676-260675 Capsella grandiflora
Cagra.6845s0073 2.0kb upstream 2.0kb upstream 10452 true Scaffold6845: 260676-271127 Capsella grandiflora
Cagra.6845s0073 2.0kb upstream 2.0kb upstream 2000 false Scaffold6845: 269128-271127 Capsella grandiflora
Cagra.6845s0073 2.0kb downstream 2.0kb downstream 10452 true Scaffold6845: 258676-269127 Capsella grandiflora
Cagra.6845s0073 2.0kb downstream 2.0kb downstream 2000 false Scaffold6845: 258676-260675 Capsella grandiflora
Cagra.6845s0073 5.0kb upstream 5.0kb upstream 13452 true Scaffold6845: 260676-274127 Capsella grandiflora
Cagra.6845s0073 5.0kb upstream 5.0kb upstream 5000 false Scaffold6845: 269128-274127 Capsella grandiflora
Cagra.6845s0073 5.0kb downstream 5.0kb downstream 13452 true Scaffold6845: 255676-269127 Capsella grandiflora
Cagra.6845s0073 5.0kb downstream 5.0kb downstream 5000 false Scaffold6845: 255676-260675 Capsella grandiflora
Cagra.6845s0073 10.0kb upstream 10.0kb upstream 18452 true Scaffold6845: 260676-279127 Capsella grandiflora
Cagra.6845s0073 10.0kb upstream 10.0kb upstream 10000 false Scaffold6845: 269128-279127 Capsella grandiflora
Cagra.6845s0073 10.0kb downstream 10.0kb downstream 18452 true Scaffold6845: 250676-269127 Capsella grandiflora
Cagra.6845s0073 10.0kb downstream 10.0kb downstream 10000 false Scaffold6845: 250676-260675 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377692 5261 Brassicaceae View MSA
123829271 5264 Brassicales-Malvales View MSA
124342143 5266 SBM View MSA
124239332 5268 Malvidae View MSA
124060620 5270 Rosid View MSA
123739059 5271 Pentapetalae View MSA
122789929 5272 Eudicot View MSA
122044079 5273 Angiosperm View MSA
121345213 5274 Embryophyte View MSA
123428270 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain