Gene : Cagra.6891s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10766//PTHR10766:SF52 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN Genomic Order:  5
Name:  ? Cagra.6891s0005 Secondary Identifier:  ? PAC:28911146
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6891s0005 0.5kb upstream 0.5kb upstream 4767 true Scaffold6891: 8286-13052 Capsella grandiflora
Cagra.6891s0005 0.5kb upstream 0.5kb upstream 179 false Scaffold6891: 12874-13052 Capsella grandiflora
Cagra.6891s0005 0.5kb downstream 0.5kb downstream 5088 true Scaffold6891: 7786-12873 Capsella grandiflora
Cagra.6891s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold6891: 7786-8285 Capsella grandiflora
Cagra.6891s0005 1.0kb upstream 1.0kb upstream 4767 true Scaffold6891: 8286-13052 Capsella grandiflora
Cagra.6891s0005 1.0kb upstream 1.0kb upstream 179 false Scaffold6891: 12874-13052 Capsella grandiflora
Cagra.6891s0005 1.0kb downstream 1.0kb downstream 5588 true Scaffold6891: 7286-12873 Capsella grandiflora
Cagra.6891s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold6891: 7286-8285 Capsella grandiflora
Cagra.6891s0005 2.0kb upstream 2.0kb upstream 4767 true Scaffold6891: 8286-13052 Capsella grandiflora
Cagra.6891s0005 2.0kb upstream 2.0kb upstream 179 false Scaffold6891: 12874-13052 Capsella grandiflora
Cagra.6891s0005 2.0kb downstream 2.0kb downstream 6588 true Scaffold6891: 6286-12873 Capsella grandiflora
Cagra.6891s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold6891: 6286-8285 Capsella grandiflora
Cagra.6891s0005 5.0kb upstream 5.0kb upstream 4767 true Scaffold6891: 8286-13052 Capsella grandiflora
Cagra.6891s0005 5.0kb upstream 5.0kb upstream 179 false Scaffold6891: 12874-13052 Capsella grandiflora
Cagra.6891s0005 5.0kb downstream 5.0kb downstream 9588 true Scaffold6891: 3286-12873 Capsella grandiflora
Cagra.6891s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold6891: 3286-8285 Capsella grandiflora
Cagra.6891s0005 10.0kb upstream 10.0kb upstream 4767 true Scaffold6891: 8286-13052 Capsella grandiflora
Cagra.6891s0005 10.0kb upstream 10.0kb upstream 179 false Scaffold6891: 12874-13052 Capsella grandiflora
Cagra.6891s0005 10.0kb downstream 10.0kb downstream 12873 true Scaffold6891: 1-12873 Capsella grandiflora
Cagra.6891s0005 10.0kb downstream 10.0kb downstream 8285 false Scaffold6891: 1-8285 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366637 5261 Brassicaceae View MSA
123841030 5264 Brassicales-Malvales View MSA
124339009 5266 SBM View MSA
124241690 5268 Malvidae View MSA
124071508 5270 Rosid View MSA
123743269 5271 Pentapetalae View MSA
122792908 5272 Eudicot View MSA
122045723 5273 Angiosperm View MSA
121344967 5274 Embryophyte View MSA
123423887 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain