Gene : Cagra.6942s0033 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32093:SF36 - EXTENSIN-LIKE PROTEIN Genomic Order:  33
Name:  ? Cagra.6942s0033 Secondary Identifier:  ? PAC:28901207
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6942s0033 0.5kb upstream 0.5kb upstream 7418 true Scaffold6942: 105309-112726 Capsella grandiflora
Cagra.6942s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold6942: 105309-105808 Capsella grandiflora
Cagra.6942s0033 0.5kb downstream 0.5kb downstream 7418 true Scaffold6942: 105809-113226 Capsella grandiflora
Cagra.6942s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold6942: 112727-113226 Capsella grandiflora
Cagra.6942s0033 1.0kb upstream 1.0kb upstream 7918 true Scaffold6942: 104809-112726 Capsella grandiflora
Cagra.6942s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold6942: 104809-105808 Capsella grandiflora
Cagra.6942s0033 1.0kb downstream 1.0kb downstream 7918 true Scaffold6942: 105809-113726 Capsella grandiflora
Cagra.6942s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold6942: 112727-113726 Capsella grandiflora
Cagra.6942s0033 2.0kb upstream 2.0kb upstream 8918 true Scaffold6942: 103809-112726 Capsella grandiflora
Cagra.6942s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold6942: 103809-105808 Capsella grandiflora
Cagra.6942s0033 2.0kb downstream 2.0kb downstream 8918 true Scaffold6942: 105809-114726 Capsella grandiflora
Cagra.6942s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold6942: 112727-114726 Capsella grandiflora
Cagra.6942s0033 5.0kb upstream 5.0kb upstream 11918 true Scaffold6942: 100809-112726 Capsella grandiflora
Cagra.6942s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold6942: 100809-105808 Capsella grandiflora
Cagra.6942s0033 5.0kb downstream 5.0kb downstream 11918 true Scaffold6942: 105809-117726 Capsella grandiflora
Cagra.6942s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold6942: 112727-117726 Capsella grandiflora
Cagra.6942s0033 10.0kb upstream 10.0kb upstream 16918 true Scaffold6942: 95809-112726 Capsella grandiflora
Cagra.6942s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold6942: 95809-105808 Capsella grandiflora
Cagra.6942s0033 10.0kb downstream 10.0kb downstream 16918 true Scaffold6942: 105809-122726 Capsella grandiflora
Cagra.6942s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold6942: 112727-122726 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374487 5261 Brassicaceae View MSA
123841362 5264 Brassicales-Malvales View MSA
124343096 5266 SBM View MSA
124240382 5268 Malvidae View MSA
124060562 5270 Rosid View MSA
123741060 5271 Pentapetalae View MSA
122794023 5272 Eudicot View MSA
122049867 5273 Angiosperm View MSA
121311623 5274 Embryophyte View MSA
123348896 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain