Gene : Cagra.6942s0035 C. grandiflora v1.1
Defline:  (1 of 27) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  35
Name:  ? Cagra.6942s0035 Secondary Identifier:  ? PAC:28901219
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6942s0035 0.5kb upstream 0.5kb upstream 5255 true Scaffold6942: 116017-121271 Capsella grandiflora
Cagra.6942s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold6942: 116017-116516 Capsella grandiflora
Cagra.6942s0035 0.5kb downstream 0.5kb downstream 5255 true Scaffold6942: 116517-121771 Capsella grandiflora
Cagra.6942s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold6942: 121272-121771 Capsella grandiflora
Cagra.6942s0035 1.0kb upstream 1.0kb upstream 5755 true Scaffold6942: 115517-121271 Capsella grandiflora
Cagra.6942s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold6942: 115517-116516 Capsella grandiflora
Cagra.6942s0035 1.0kb downstream 1.0kb downstream 5755 true Scaffold6942: 116517-122271 Capsella grandiflora
Cagra.6942s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold6942: 121272-122271 Capsella grandiflora
Cagra.6942s0035 2.0kb upstream 2.0kb upstream 6755 true Scaffold6942: 114517-121271 Capsella grandiflora
Cagra.6942s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold6942: 114517-116516 Capsella grandiflora
Cagra.6942s0035 2.0kb downstream 2.0kb downstream 6755 true Scaffold6942: 116517-123271 Capsella grandiflora
Cagra.6942s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold6942: 121272-123271 Capsella grandiflora
Cagra.6942s0035 5.0kb upstream 5.0kb upstream 9755 true Scaffold6942: 111517-121271 Capsella grandiflora
Cagra.6942s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold6942: 111517-116516 Capsella grandiflora
Cagra.6942s0035 5.0kb downstream 5.0kb downstream 9755 true Scaffold6942: 116517-126271 Capsella grandiflora
Cagra.6942s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold6942: 121272-126271 Capsella grandiflora
Cagra.6942s0035 10.0kb upstream 10.0kb upstream 14755 true Scaffold6942: 106517-121271 Capsella grandiflora
Cagra.6942s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold6942: 106517-116516 Capsella grandiflora
Cagra.6942s0035 10.0kb downstream 10.0kb downstream 14755 true Scaffold6942: 116517-131271 Capsella grandiflora
Cagra.6942s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold6942: 121272-131271 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361725 5261 Brassicaceae View MSA
123839072 5264 Brassicales-Malvales View MSA
124344810 5266 SBM View MSA
124238568 5268 Malvidae View MSA
124066069 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain