Gene : Cagra.6943s0012 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23074:SF95 - AAA-TYPE ATPASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  12
Name:  ? Cagra.6943s0012 Secondary Identifier:  ? PAC:28894539
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6943s0012 0.5kb upstream 0.5kb upstream 8059 true Scaffold6943: 32868-40926 Capsella grandiflora
Cagra.6943s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold6943: 32868-33367 Capsella grandiflora
Cagra.6943s0012 0.5kb downstream 0.5kb downstream 8059 true Scaffold6943: 33368-41426 Capsella grandiflora
Cagra.6943s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold6943: 40927-41426 Capsella grandiflora
Cagra.6943s0012 1.0kb upstream 1.0kb upstream 8559 true Scaffold6943: 32368-40926 Capsella grandiflora
Cagra.6943s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold6943: 32368-33367 Capsella grandiflora
Cagra.6943s0012 1.0kb downstream 1.0kb downstream 8559 true Scaffold6943: 33368-41926 Capsella grandiflora
Cagra.6943s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold6943: 40927-41926 Capsella grandiflora
Cagra.6943s0012 2.0kb upstream 2.0kb upstream 9559 true Scaffold6943: 31368-40926 Capsella grandiflora
Cagra.6943s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold6943: 31368-33367 Capsella grandiflora
Cagra.6943s0012 2.0kb downstream 2.0kb downstream 9559 true Scaffold6943: 33368-42926 Capsella grandiflora
Cagra.6943s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold6943: 40927-42926 Capsella grandiflora
Cagra.6943s0012 5.0kb upstream 5.0kb upstream 12559 true Scaffold6943: 28368-40926 Capsella grandiflora
Cagra.6943s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold6943: 28368-33367 Capsella grandiflora
Cagra.6943s0012 5.0kb downstream 5.0kb downstream 12559 true Scaffold6943: 33368-45926 Capsella grandiflora
Cagra.6943s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold6943: 40927-45926 Capsella grandiflora
Cagra.6943s0012 10.0kb upstream 10.0kb upstream 17559 true Scaffold6943: 23368-40926 Capsella grandiflora
Cagra.6943s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold6943: 23368-33367 Capsella grandiflora
Cagra.6943s0012 10.0kb downstream 10.0kb downstream 17559 true Scaffold6943: 33368-50926 Capsella grandiflora
Cagra.6943s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold6943: 40927-50926 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334199 5261 Brassicaceae Singleton cluster - no MSA
123775065 5264 Brassicales-Malvales Singleton cluster - no MSA
124273481 5266 SBM Singleton cluster - no MSA
124249795 5268 Malvidae View MSA
124068786 5270 Rosid View MSA
123736578 5271 Pentapetalae View MSA
122786690 5272 Eudicot View MSA
122044741 5273 Angiosperm View MSA
121348057 5274 Embryophyte View MSA
123380716 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain