Gene : Cagra.6946s0001 C. grandiflora v1.1
Defline:  (1 of 1) 2.6.1.45 - Serine--glyoxylate transaminase / SGAT Genomic Order:  1
Name:  ? Cagra.6946s0001 Secondary Identifier:  ? PAC:28909949
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora GLYSYN-ALA-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6946s0001 0.5kb upstream 0.5kb upstream 2236 true Scaffold6946: 56-2291 Capsella grandiflora
Cagra.6946s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold6946: 1792-2291 Capsella grandiflora
Cagra.6946s0001 0.5kb downstream 0.5kb downstream 1791 true Scaffold6946: 1-1791 Capsella grandiflora
Cagra.6946s0001 0.5kb downstream 0.5kb downstream 55 false Scaffold6946: 1-55 Capsella grandiflora
Cagra.6946s0001 1.0kb upstream 1.0kb upstream 2736 true Scaffold6946: 56-2791 Capsella grandiflora
Cagra.6946s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold6946: 1792-2791 Capsella grandiflora
Cagra.6946s0001 1.0kb downstream 1.0kb downstream 1791 true Scaffold6946: 1-1791 Capsella grandiflora
Cagra.6946s0001 1.0kb downstream 1.0kb downstream 55 false Scaffold6946: 1-55 Capsella grandiflora
Cagra.6946s0001 2.0kb upstream 2.0kb upstream 3736 true Scaffold6946: 56-3791 Capsella grandiflora
Cagra.6946s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold6946: 1792-3791 Capsella grandiflora
Cagra.6946s0001 2.0kb downstream 2.0kb downstream 1791 true Scaffold6946: 1-1791 Capsella grandiflora
Cagra.6946s0001 2.0kb downstream 2.0kb downstream 55 false Scaffold6946: 1-55 Capsella grandiflora
Cagra.6946s0001 5.0kb upstream 5.0kb upstream 6736 true Scaffold6946: 56-6791 Capsella grandiflora
Cagra.6946s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold6946: 1792-6791 Capsella grandiflora
Cagra.6946s0001 5.0kb downstream 5.0kb downstream 1791 true Scaffold6946: 1-1791 Capsella grandiflora
Cagra.6946s0001 5.0kb downstream 5.0kb downstream 55 false Scaffold6946: 1-55 Capsella grandiflora
Cagra.6946s0001 10.0kb upstream 10.0kb upstream 11736 true Scaffold6946: 56-11791 Capsella grandiflora
Cagra.6946s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold6946: 1792-11791 Capsella grandiflora
Cagra.6946s0001 10.0kb downstream 10.0kb downstream 1791 true Scaffold6946: 1-1791 Capsella grandiflora
Cagra.6946s0001 10.0kb downstream 10.0kb downstream 55 false Scaffold6946: 1-55 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378838 5261 Brassicaceae View MSA
123836334 5264 Brassicales-Malvales View MSA
124344247 5266 SBM View MSA
124241250 5268 Malvidae View MSA
124065045 5270 Rosid View MSA
123739482 5271 Pentapetalae View MSA
122787135 5272 Eudicot View MSA
122044965 5273 Angiosperm View MSA
121345609 5274 Embryophyte View MSA
123427199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain