Gene : Cagra.6943s0033 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11785:SF338 - POLYAMINE TRANSPORTER RMV1 Genomic Order:  33
Name:  ? Cagra.6943s0033 Secondary Identifier:  ? PAC:28894550
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6943s0033 0.5kb upstream 0.5kb upstream 2703 true Scaffold6943: 108625-111327 Capsella grandiflora
Cagra.6943s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold6943: 108625-109124 Capsella grandiflora
Cagra.6943s0033 0.5kb downstream 0.5kb downstream 2703 true Scaffold6943: 109125-111827 Capsella grandiflora
Cagra.6943s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold6943: 111328-111827 Capsella grandiflora
Cagra.6943s0033 1.0kb upstream 1.0kb upstream 3203 true Scaffold6943: 108125-111327 Capsella grandiflora
Cagra.6943s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold6943: 108125-109124 Capsella grandiflora
Cagra.6943s0033 1.0kb downstream 1.0kb downstream 3203 true Scaffold6943: 109125-112327 Capsella grandiflora
Cagra.6943s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold6943: 111328-112327 Capsella grandiflora
Cagra.6943s0033 2.0kb upstream 2.0kb upstream 4203 true Scaffold6943: 107125-111327 Capsella grandiflora
Cagra.6943s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold6943: 107125-109124 Capsella grandiflora
Cagra.6943s0033 2.0kb downstream 2.0kb downstream 4203 true Scaffold6943: 109125-113327 Capsella grandiflora
Cagra.6943s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold6943: 111328-113327 Capsella grandiflora
Cagra.6943s0033 5.0kb upstream 5.0kb upstream 7203 true Scaffold6943: 104125-111327 Capsella grandiflora
Cagra.6943s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold6943: 104125-109124 Capsella grandiflora
Cagra.6943s0033 5.0kb downstream 5.0kb downstream 7203 true Scaffold6943: 109125-116327 Capsella grandiflora
Cagra.6943s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold6943: 111328-116327 Capsella grandiflora
Cagra.6943s0033 10.0kb upstream 10.0kb upstream 12203 true Scaffold6943: 99125-111327 Capsella grandiflora
Cagra.6943s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold6943: 99125-109124 Capsella grandiflora
Cagra.6943s0033 10.0kb downstream 10.0kb downstream 7714 true Scaffold6943: 109125-116838 Capsella grandiflora
Cagra.6943s0033 10.0kb downstream 10.0kb downstream 5511 false Scaffold6943: 111328-116838 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367548 5261 Brassicaceae View MSA
123834558 5264 Brassicales-Malvales View MSA
124340418 5266 SBM View MSA
124251423 5268 Malvidae View MSA
124068047 5270 Rosid View MSA
123738563 5271 Pentapetalae View MSA
122792232 5272 Eudicot View MSA
122042017 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain