Gene : Cagra.6952s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13038 - APG9 AUTOPHAGY 9 Genomic Order:  4
Name:  ? Cagra.6952s0004 Secondary Identifier:  ? PAC:28900309
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6952s0004 0.5kb upstream 0.5kb upstream 5853 true Scaffold6952: 15566-21418 Capsella grandiflora
Cagra.6952s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold6952: 20919-21418 Capsella grandiflora
Cagra.6952s0004 0.5kb downstream 0.5kb downstream 5853 true Scaffold6952: 15066-20918 Capsella grandiflora
Cagra.6952s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold6952: 15066-15565 Capsella grandiflora
Cagra.6952s0004 1.0kb upstream 1.0kb upstream 6353 true Scaffold6952: 15566-21918 Capsella grandiflora
Cagra.6952s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold6952: 20919-21918 Capsella grandiflora
Cagra.6952s0004 1.0kb downstream 1.0kb downstream 6353 true Scaffold6952: 14566-20918 Capsella grandiflora
Cagra.6952s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold6952: 14566-15565 Capsella grandiflora
Cagra.6952s0004 2.0kb upstream 2.0kb upstream 7353 true Scaffold6952: 15566-22918 Capsella grandiflora
Cagra.6952s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold6952: 20919-22918 Capsella grandiflora
Cagra.6952s0004 2.0kb downstream 2.0kb downstream 7353 true Scaffold6952: 13566-20918 Capsella grandiflora
Cagra.6952s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold6952: 13566-15565 Capsella grandiflora
Cagra.6952s0004 5.0kb upstream 5.0kb upstream 10353 true Scaffold6952: 15566-25918 Capsella grandiflora
Cagra.6952s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold6952: 20919-25918 Capsella grandiflora
Cagra.6952s0004 5.0kb downstream 5.0kb downstream 10353 true Scaffold6952: 10566-20918 Capsella grandiflora
Cagra.6952s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold6952: 10566-15565 Capsella grandiflora
Cagra.6952s0004 10.0kb upstream 10.0kb upstream 15353 true Scaffold6952: 15566-30918 Capsella grandiflora
Cagra.6952s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold6952: 20919-30918 Capsella grandiflora
Cagra.6952s0004 10.0kb downstream 10.0kb downstream 15353 true Scaffold6952: 5566-20918 Capsella grandiflora
Cagra.6952s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold6952: 5566-15565 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367461 5261 Brassicaceae View MSA
123835788 5264 Brassicales-Malvales View MSA
124342391 5266 SBM View MSA
124246330 5268 Malvidae View MSA
124064260 5270 Rosid View MSA
123743706 5271 Pentapetalae View MSA
122786972 5272 Eudicot View MSA
122044754 5273 Angiosperm View MSA
121345191 5274 Embryophyte View MSA
123424941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain