Gene : Cagra.6788s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11753//PTHR11753:SF16 - CLATHRIN COAT ASSEMBLY PROTEIN Genomic Order:  5
Name:  ? Cagra.6788s0005 Secondary Identifier:  ? PAC:28905441
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6788s0005 0.5kb upstream 0.5kb upstream 2494 true Scaffold6788: 20830-23323 Capsella grandiflora
Cagra.6788s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold6788: 22824-23323 Capsella grandiflora
Cagra.6788s0005 0.5kb downstream 0.5kb downstream 2494 true Scaffold6788: 20330-22823 Capsella grandiflora
Cagra.6788s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold6788: 20330-20829 Capsella grandiflora
Cagra.6788s0005 1.0kb upstream 1.0kb upstream 2994 true Scaffold6788: 20830-23823 Capsella grandiflora
Cagra.6788s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold6788: 22824-23823 Capsella grandiflora
Cagra.6788s0005 1.0kb downstream 1.0kb downstream 2994 true Scaffold6788: 19830-22823 Capsella grandiflora
Cagra.6788s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold6788: 19830-20829 Capsella grandiflora
Cagra.6788s0005 2.0kb upstream 2.0kb upstream 3994 true Scaffold6788: 20830-24823 Capsella grandiflora
Cagra.6788s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold6788: 22824-24823 Capsella grandiflora
Cagra.6788s0005 2.0kb downstream 2.0kb downstream 3994 true Scaffold6788: 18830-22823 Capsella grandiflora
Cagra.6788s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold6788: 18830-20829 Capsella grandiflora
Cagra.6788s0005 5.0kb upstream 5.0kb upstream 6994 true Scaffold6788: 20830-27823 Capsella grandiflora
Cagra.6788s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold6788: 22824-27823 Capsella grandiflora
Cagra.6788s0005 5.0kb downstream 5.0kb downstream 6994 true Scaffold6788: 15830-22823 Capsella grandiflora
Cagra.6788s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold6788: 15830-20829 Capsella grandiflora
Cagra.6788s0005 10.0kb upstream 10.0kb upstream 11994 true Scaffold6788: 20830-32823 Capsella grandiflora
Cagra.6788s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold6788: 22824-32823 Capsella grandiflora
Cagra.6788s0005 10.0kb downstream 10.0kb downstream 11994 true Scaffold6788: 10830-22823 Capsella grandiflora
Cagra.6788s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold6788: 10830-20829 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364248 5261 Brassicaceae View MSA
123837085 5264 Brassicales-Malvales View MSA
124345365 5266 SBM View MSA
124253668 5268 Malvidae View MSA
124061587 5270 Rosid View MSA
123746218 5271 Pentapetalae View MSA
122797557 5272 Eudicot View MSA
122046601 5273 Angiosperm View MSA
121344866 5274 Embryophyte View MSA
123426690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain