Gene : Cagra.6788s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24193//PTHR24193:SF88 - ANKYRIN REPEAT PROTEIN Genomic Order:  4
Name:  ? Cagra.6788s0004 Secondary Identifier:  ? PAC:28905443
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6788s0004 0.5kb upstream 0.5kb upstream 2789 true Scaffold6788: 18269-21057 Capsella grandiflora
Cagra.6788s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold6788: 20558-21057 Capsella grandiflora
Cagra.6788s0004 0.5kb downstream 0.5kb downstream 2789 true Scaffold6788: 17769-20557 Capsella grandiflora
Cagra.6788s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold6788: 17769-18268 Capsella grandiflora
Cagra.6788s0004 1.0kb upstream 1.0kb upstream 3289 true Scaffold6788: 18269-21557 Capsella grandiflora
Cagra.6788s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold6788: 20558-21557 Capsella grandiflora
Cagra.6788s0004 1.0kb downstream 1.0kb downstream 3289 true Scaffold6788: 17269-20557 Capsella grandiflora
Cagra.6788s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold6788: 17269-18268 Capsella grandiflora
Cagra.6788s0004 2.0kb upstream 2.0kb upstream 4289 true Scaffold6788: 18269-22557 Capsella grandiflora
Cagra.6788s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold6788: 20558-22557 Capsella grandiflora
Cagra.6788s0004 2.0kb downstream 2.0kb downstream 4289 true Scaffold6788: 16269-20557 Capsella grandiflora
Cagra.6788s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold6788: 16269-18268 Capsella grandiflora
Cagra.6788s0004 5.0kb upstream 5.0kb upstream 7289 true Scaffold6788: 18269-25557 Capsella grandiflora
Cagra.6788s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold6788: 20558-25557 Capsella grandiflora
Cagra.6788s0004 5.0kb downstream 5.0kb downstream 7289 true Scaffold6788: 13269-20557 Capsella grandiflora
Cagra.6788s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold6788: 13269-18268 Capsella grandiflora
Cagra.6788s0004 10.0kb upstream 10.0kb upstream 12289 true Scaffold6788: 18269-30557 Capsella grandiflora
Cagra.6788s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold6788: 20558-30557 Capsella grandiflora
Cagra.6788s0004 10.0kb downstream 10.0kb downstream 12289 true Scaffold6788: 8269-20557 Capsella grandiflora
Cagra.6788s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold6788: 8269-18268 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361620 5261 Brassicaceae View MSA
123839963 5264 Brassicales-Malvales View MSA
124347744 5266 SBM View MSA
124242153 5268 Malvidae View MSA
124068894 5270 Rosid View MSA
123744491 5271 Pentapetalae View MSA
122791485 5272 Eudicot View MSA
122047737 5273 Angiosperm View MSA
121344886 5274 Embryophyte View MSA
123428373 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain