Gene : Cagra.6845s0052 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11353:SF21 - T-COMPLEX PROTEIN 1 SUBUNIT ZETA Genomic Order:  52
Name:  ? Cagra.6845s0052 Secondary Identifier:  ? PAC:28894090
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6845s0052 0.5kb upstream 0.5kb upstream 4799 true Scaffold6845: 177533-182331 Capsella grandiflora
Cagra.6845s0052 0.5kb upstream 0.5kb upstream 500 false Scaffold6845: 181832-182331 Capsella grandiflora
Cagra.6845s0052 0.5kb downstream 0.5kb downstream 4799 true Scaffold6845: 177033-181831 Capsella grandiflora
Cagra.6845s0052 0.5kb downstream 0.5kb downstream 500 false Scaffold6845: 177033-177532 Capsella grandiflora
Cagra.6845s0052 1.0kb upstream 1.0kb upstream 5299 true Scaffold6845: 177533-182831 Capsella grandiflora
Cagra.6845s0052 1.0kb upstream 1.0kb upstream 1000 false Scaffold6845: 181832-182831 Capsella grandiflora
Cagra.6845s0052 1.0kb downstream 1.0kb downstream 5299 true Scaffold6845: 176533-181831 Capsella grandiflora
Cagra.6845s0052 1.0kb downstream 1.0kb downstream 1000 false Scaffold6845: 176533-177532 Capsella grandiflora
Cagra.6845s0052 2.0kb upstream 2.0kb upstream 6299 true Scaffold6845: 177533-183831 Capsella grandiflora
Cagra.6845s0052 2.0kb upstream 2.0kb upstream 2000 false Scaffold6845: 181832-183831 Capsella grandiflora
Cagra.6845s0052 2.0kb downstream 2.0kb downstream 6299 true Scaffold6845: 175533-181831 Capsella grandiflora
Cagra.6845s0052 2.0kb downstream 2.0kb downstream 2000 false Scaffold6845: 175533-177532 Capsella grandiflora
Cagra.6845s0052 5.0kb upstream 5.0kb upstream 9299 true Scaffold6845: 177533-186831 Capsella grandiflora
Cagra.6845s0052 5.0kb upstream 5.0kb upstream 5000 false Scaffold6845: 181832-186831 Capsella grandiflora
Cagra.6845s0052 5.0kb downstream 5.0kb downstream 9299 true Scaffold6845: 172533-181831 Capsella grandiflora
Cagra.6845s0052 5.0kb downstream 5.0kb downstream 5000 false Scaffold6845: 172533-177532 Capsella grandiflora
Cagra.6845s0052 10.0kb upstream 10.0kb upstream 14299 true Scaffold6845: 177533-191831 Capsella grandiflora
Cagra.6845s0052 10.0kb upstream 10.0kb upstream 10000 false Scaffold6845: 181832-191831 Capsella grandiflora
Cagra.6845s0052 10.0kb downstream 10.0kb downstream 14299 true Scaffold6845: 167533-181831 Capsella grandiflora
Cagra.6845s0052 10.0kb downstream 10.0kb downstream 10000 false Scaffold6845: 167533-177532 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338353 5261 Brassicaceae View MSA
123778939 5264 Brassicales-Malvales View MSA
124277273 5266 SBM View MSA
124132490 5268 Malvidae View MSA
124066156 5270 Rosid View MSA
123744812 5271 Pentapetalae View MSA
122790863 5272 Eudicot View MSA
122045313 5273 Angiosperm View MSA
121344896 5274 Embryophyte View MSA
123424625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain