Gene : Cagra.6845s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 Genomic Order:  7
Name:  ? Cagra.6845s0007 Secondary Identifier:  ? PAC:28894035
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6845s0007 0.5kb upstream 0.5kb upstream 2522 true Scaffold6845: 23281-25802 Capsella grandiflora
Cagra.6845s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold6845: 23281-23780 Capsella grandiflora
Cagra.6845s0007 0.5kb downstream 0.5kb downstream 2522 true Scaffold6845: 23781-26302 Capsella grandiflora
Cagra.6845s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold6845: 25803-26302 Capsella grandiflora
Cagra.6845s0007 1.0kb upstream 1.0kb upstream 3022 true Scaffold6845: 22781-25802 Capsella grandiflora
Cagra.6845s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold6845: 22781-23780 Capsella grandiflora
Cagra.6845s0007 1.0kb downstream 1.0kb downstream 3022 true Scaffold6845: 23781-26802 Capsella grandiflora
Cagra.6845s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold6845: 25803-26802 Capsella grandiflora
Cagra.6845s0007 2.0kb upstream 2.0kb upstream 4022 true Scaffold6845: 21781-25802 Capsella grandiflora
Cagra.6845s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold6845: 21781-23780 Capsella grandiflora
Cagra.6845s0007 2.0kb downstream 2.0kb downstream 4022 true Scaffold6845: 23781-27802 Capsella grandiflora
Cagra.6845s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold6845: 25803-27802 Capsella grandiflora
Cagra.6845s0007 5.0kb upstream 5.0kb upstream 7022 true Scaffold6845: 18781-25802 Capsella grandiflora
Cagra.6845s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold6845: 18781-23780 Capsella grandiflora
Cagra.6845s0007 5.0kb downstream 5.0kb downstream 7022 true Scaffold6845: 23781-30802 Capsella grandiflora
Cagra.6845s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold6845: 25803-30802 Capsella grandiflora
Cagra.6845s0007 10.0kb upstream 10.0kb upstream 12022 true Scaffold6845: 13781-25802 Capsella grandiflora
Cagra.6845s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold6845: 13781-23780 Capsella grandiflora
Cagra.6845s0007 10.0kb downstream 10.0kb downstream 12022 true Scaffold6845: 23781-35802 Capsella grandiflora
Cagra.6845s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold6845: 25803-35802 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369543 5261 Brassicaceae View MSA
123833441 5264 Brassicales-Malvales View MSA
124348545 5266 SBM View MSA
124248758 5268 Malvidae View MSA
124068379 5270 Rosid View MSA
123742644 5271 Pentapetalae View MSA
122793742 5272 Eudicot View MSA
122043541 5273 Angiosperm View MSA
121349086 5274 Embryophyte View MSA
123381159 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain