Gene : Cagra.6845s0019 C. grandiflora v1.1
Defline:  (1 of 1) KOG4655 - U3 small nucleolar ribonucleoprotein (snoRNP) component Genomic Order:  19
Name:  ? Cagra.6845s0019 Secondary Identifier:  ? PAC:28894060
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6845s0019 0.5kb upstream 0.5kb upstream 1875 true Scaffold6845: 73306-75180 Capsella grandiflora
Cagra.6845s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold6845: 73306-73805 Capsella grandiflora
Cagra.6845s0019 0.5kb downstream 0.5kb downstream 1875 true Scaffold6845: 73806-75680 Capsella grandiflora
Cagra.6845s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold6845: 75181-75680 Capsella grandiflora
Cagra.6845s0019 1.0kb upstream 1.0kb upstream 2375 true Scaffold6845: 72806-75180 Capsella grandiflora
Cagra.6845s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold6845: 72806-73805 Capsella grandiflora
Cagra.6845s0019 1.0kb downstream 1.0kb downstream 2375 true Scaffold6845: 73806-76180 Capsella grandiflora
Cagra.6845s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold6845: 75181-76180 Capsella grandiflora
Cagra.6845s0019 2.0kb upstream 2.0kb upstream 3375 true Scaffold6845: 71806-75180 Capsella grandiflora
Cagra.6845s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold6845: 71806-73805 Capsella grandiflora
Cagra.6845s0019 2.0kb downstream 2.0kb downstream 3375 true Scaffold6845: 73806-77180 Capsella grandiflora
Cagra.6845s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold6845: 75181-77180 Capsella grandiflora
Cagra.6845s0019 5.0kb upstream 5.0kb upstream 6375 true Scaffold6845: 68806-75180 Capsella grandiflora
Cagra.6845s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold6845: 68806-73805 Capsella grandiflora
Cagra.6845s0019 5.0kb downstream 5.0kb downstream 6375 true Scaffold6845: 73806-80180 Capsella grandiflora
Cagra.6845s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold6845: 75181-80180 Capsella grandiflora
Cagra.6845s0019 10.0kb upstream 10.0kb upstream 11375 true Scaffold6845: 63806-75180 Capsella grandiflora
Cagra.6845s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold6845: 63806-73805 Capsella grandiflora
Cagra.6845s0019 10.0kb downstream 10.0kb downstream 11375 true Scaffold6845: 73806-85180 Capsella grandiflora
Cagra.6845s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold6845: 75181-85180 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374223 5261 Brassicaceae View MSA
123827414 5264 Brassicales-Malvales View MSA
124346220 5266 SBM View MSA
124238648 5268 Malvidae View MSA
124067940 5270 Rosid View MSA
123740372 5271 Pentapetalae View MSA
122792450 5272 Eudicot View MSA
122044096 5273 Angiosperm View MSA
121345167 5274 Embryophyte View MSA
123424004 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain