Gene : Cagra.6845s0036 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 Genomic Order:  36
Name:  ? Cagra.6845s0036 Secondary Identifier:  ? PAC:28894098
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6845s0036 0.5kb upstream 0.5kb upstream 4898 true Scaffold6845: 131586-136483 Capsella grandiflora
Cagra.6845s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold6845: 131586-132085 Capsella grandiflora
Cagra.6845s0036 0.5kb downstream 0.5kb downstream 4898 true Scaffold6845: 132086-136983 Capsella grandiflora
Cagra.6845s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold6845: 136484-136983 Capsella grandiflora
Cagra.6845s0036 1.0kb upstream 1.0kb upstream 5398 true Scaffold6845: 131086-136483 Capsella grandiflora
Cagra.6845s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold6845: 131086-132085 Capsella grandiflora
Cagra.6845s0036 1.0kb downstream 1.0kb downstream 5398 true Scaffold6845: 132086-137483 Capsella grandiflora
Cagra.6845s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold6845: 136484-137483 Capsella grandiflora
Cagra.6845s0036 2.0kb upstream 2.0kb upstream 6398 true Scaffold6845: 130086-136483 Capsella grandiflora
Cagra.6845s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold6845: 130086-132085 Capsella grandiflora
Cagra.6845s0036 2.0kb downstream 2.0kb downstream 6398 true Scaffold6845: 132086-138483 Capsella grandiflora
Cagra.6845s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold6845: 136484-138483 Capsella grandiflora
Cagra.6845s0036 5.0kb upstream 5.0kb upstream 9398 true Scaffold6845: 127086-136483 Capsella grandiflora
Cagra.6845s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold6845: 127086-132085 Capsella grandiflora
Cagra.6845s0036 5.0kb downstream 5.0kb downstream 9398 true Scaffold6845: 132086-141483 Capsella grandiflora
Cagra.6845s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold6845: 136484-141483 Capsella grandiflora
Cagra.6845s0036 10.0kb upstream 10.0kb upstream 14398 true Scaffold6845: 122086-136483 Capsella grandiflora
Cagra.6845s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold6845: 122086-132085 Capsella grandiflora
Cagra.6845s0036 10.0kb downstream 10.0kb downstream 14398 true Scaffold6845: 132086-146483 Capsella grandiflora
Cagra.6845s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold6845: 136484-146483 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363583 5261 Brassicaceae View MSA
123833026 5264 Brassicales-Malvales View MSA
124338779 5266 SBM View MSA
124241301 5268 Malvidae View MSA
124065348 5270 Rosid View MSA
123736538 5271 Pentapetalae View MSA
122789208 5272 Eudicot View MSA
122042538 5273 Angiosperm View MSA
121345004 5274 Embryophyte View MSA
123424617 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain