Gene : Cagra.6845s0059 C. grandiflora v1.1
Defline:  (1 of 2) PTHR17224:SF3 - CHLOROPLASTIC GROUP IIB INTRON SPLICING FACILITATOR CRS2-A, CHLOROPLASTIC-RELATED Genomic Order:  59
Name:  ? Cagra.6845s0059 Secondary Identifier:  ? PAC:28894062
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6845s0059 0.5kb upstream 0.5kb upstream 2302 true Scaffold6845: 205115-207416 Capsella grandiflora
Cagra.6845s0059 0.5kb upstream 0.5kb upstream 500 false Scaffold6845: 206917-207416 Capsella grandiflora
Cagra.6845s0059 0.5kb downstream 0.5kb downstream 2302 true Scaffold6845: 204615-206916 Capsella grandiflora
Cagra.6845s0059 0.5kb downstream 0.5kb downstream 500 false Scaffold6845: 204615-205114 Capsella grandiflora
Cagra.6845s0059 1.0kb upstream 1.0kb upstream 2802 true Scaffold6845: 205115-207916 Capsella grandiflora
Cagra.6845s0059 1.0kb upstream 1.0kb upstream 1000 false Scaffold6845: 206917-207916 Capsella grandiflora
Cagra.6845s0059 1.0kb downstream 1.0kb downstream 2802 true Scaffold6845: 204115-206916 Capsella grandiflora
Cagra.6845s0059 1.0kb downstream 1.0kb downstream 1000 false Scaffold6845: 204115-205114 Capsella grandiflora
Cagra.6845s0059 2.0kb upstream 2.0kb upstream 3802 true Scaffold6845: 205115-208916 Capsella grandiflora
Cagra.6845s0059 2.0kb upstream 2.0kb upstream 2000 false Scaffold6845: 206917-208916 Capsella grandiflora
Cagra.6845s0059 2.0kb downstream 2.0kb downstream 3802 true Scaffold6845: 203115-206916 Capsella grandiflora
Cagra.6845s0059 2.0kb downstream 2.0kb downstream 2000 false Scaffold6845: 203115-205114 Capsella grandiflora
Cagra.6845s0059 5.0kb upstream 5.0kb upstream 6802 true Scaffold6845: 205115-211916 Capsella grandiflora
Cagra.6845s0059 5.0kb upstream 5.0kb upstream 5000 false Scaffold6845: 206917-211916 Capsella grandiflora
Cagra.6845s0059 5.0kb downstream 5.0kb downstream 6802 true Scaffold6845: 200115-206916 Capsella grandiflora
Cagra.6845s0059 5.0kb downstream 5.0kb downstream 5000 false Scaffold6845: 200115-205114 Capsella grandiflora
Cagra.6845s0059 10.0kb upstream 10.0kb upstream 11802 true Scaffold6845: 205115-216916 Capsella grandiflora
Cagra.6845s0059 10.0kb upstream 10.0kb upstream 10000 false Scaffold6845: 206917-216916 Capsella grandiflora
Cagra.6845s0059 10.0kb downstream 10.0kb downstream 11802 true Scaffold6845: 195115-206916 Capsella grandiflora
Cagra.6845s0059 10.0kb downstream 10.0kb downstream 10000 false Scaffold6845: 195115-205114 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369822 5261 Brassicaceae View MSA
123836540 5264 Brassicales-Malvales View MSA
124336463 5266 SBM View MSA
124238941 5268 Malvidae View MSA
124065240 5270 Rosid View MSA
123737233 5271 Pentapetalae View MSA
122785748 5272 Eudicot View MSA
122047597 5273 Angiosperm View MSA
121310770 5274 Embryophyte View MSA
123426354 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain