Gene : Cagra.6704s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10516//PTHR10516:SF299 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  5
Name:  ? Cagra.6704s0005 Secondary Identifier:  ? PAC:28908827
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6704s0005 0.5kb upstream 0.5kb upstream 4020 true Scaffold6704: 19973-23992 Capsella grandiflora
Cagra.6704s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold6704: 23493-23992 Capsella grandiflora
Cagra.6704s0005 0.5kb downstream 0.5kb downstream 4020 true Scaffold6704: 19473-23492 Capsella grandiflora
Cagra.6704s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold6704: 19473-19972 Capsella grandiflora
Cagra.6704s0005 1.0kb upstream 1.0kb upstream 4520 true Scaffold6704: 19973-24492 Capsella grandiflora
Cagra.6704s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold6704: 23493-24492 Capsella grandiflora
Cagra.6704s0005 1.0kb downstream 1.0kb downstream 4520 true Scaffold6704: 18973-23492 Capsella grandiflora
Cagra.6704s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold6704: 18973-19972 Capsella grandiflora
Cagra.6704s0005 2.0kb upstream 2.0kb upstream 5520 true Scaffold6704: 19973-25492 Capsella grandiflora
Cagra.6704s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold6704: 23493-25492 Capsella grandiflora
Cagra.6704s0005 2.0kb downstream 2.0kb downstream 5520 true Scaffold6704: 17973-23492 Capsella grandiflora
Cagra.6704s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold6704: 17973-19972 Capsella grandiflora
Cagra.6704s0005 5.0kb upstream 5.0kb upstream 8520 true Scaffold6704: 19973-28492 Capsella grandiflora
Cagra.6704s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold6704: 23493-28492 Capsella grandiflora
Cagra.6704s0005 5.0kb downstream 5.0kb downstream 8520 true Scaffold6704: 14973-23492 Capsella grandiflora
Cagra.6704s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold6704: 14973-19972 Capsella grandiflora
Cagra.6704s0005 10.0kb upstream 10.0kb upstream 13520 true Scaffold6704: 19973-33492 Capsella grandiflora
Cagra.6704s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold6704: 23493-33492 Capsella grandiflora
Cagra.6704s0005 10.0kb downstream 10.0kb downstream 13520 true Scaffold6704: 9973-23492 Capsella grandiflora
Cagra.6704s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold6704: 9973-19972 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375600 5261 Brassicaceae View MSA
123830456 5264 Brassicales-Malvales View MSA
124336486 5266 SBM View MSA
124243874 5268 Malvidae View MSA
124067136 5270 Rosid View MSA
123746363 5271 Pentapetalae View MSA
122792796 5272 Eudicot View MSA
122047440 5273 Angiosperm View MSA
121347490 5274 Embryophyte View MSA
123426312 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain