Gene : Cagra.6722s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11593 - 60S RIBOSOMAL PROTEIN L17 Genomic Order:  2
Name:  ? Cagra.6722s0002 Secondary Identifier:  ? PAC:28907265
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6722s0002 0.5kb upstream 0.5kb upstream 2369 true Scaffold6722: 3061-5429 Capsella grandiflora
Cagra.6722s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold6722: 4930-5429 Capsella grandiflora
Cagra.6722s0002 0.5kb downstream 0.5kb downstream 2369 true Scaffold6722: 2561-4929 Capsella grandiflora
Cagra.6722s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold6722: 2561-3060 Capsella grandiflora
Cagra.6722s0002 1.0kb upstream 1.0kb upstream 2869 true Scaffold6722: 3061-5929 Capsella grandiflora
Cagra.6722s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold6722: 4930-5929 Capsella grandiflora
Cagra.6722s0002 1.0kb downstream 1.0kb downstream 2869 true Scaffold6722: 2061-4929 Capsella grandiflora
Cagra.6722s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold6722: 2061-3060 Capsella grandiflora
Cagra.6722s0002 2.0kb upstream 2.0kb upstream 3869 true Scaffold6722: 3061-6929 Capsella grandiflora
Cagra.6722s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold6722: 4930-6929 Capsella grandiflora
Cagra.6722s0002 2.0kb downstream 2.0kb downstream 3869 true Scaffold6722: 1061-4929 Capsella grandiflora
Cagra.6722s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold6722: 1061-3060 Capsella grandiflora
Cagra.6722s0002 5.0kb upstream 5.0kb upstream 6869 true Scaffold6722: 3061-9929 Capsella grandiflora
Cagra.6722s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold6722: 4930-9929 Capsella grandiflora
Cagra.6722s0002 5.0kb downstream 5.0kb downstream 4929 true Scaffold6722: 1-4929 Capsella grandiflora
Cagra.6722s0002 5.0kb downstream 5.0kb downstream 3060 false Scaffold6722: 1-3060 Capsella grandiflora
Cagra.6722s0002 10.0kb upstream 10.0kb upstream 11869 true Scaffold6722: 3061-14929 Capsella grandiflora
Cagra.6722s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold6722: 4930-14929 Capsella grandiflora
Cagra.6722s0002 10.0kb downstream 10.0kb downstream 4929 true Scaffold6722: 1-4929 Capsella grandiflora
Cagra.6722s0002 10.0kb downstream 10.0kb downstream 3060 false Scaffold6722: 1-3060 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381990 5261 Brassicaceae View MSA
123842804 5264 Brassicales-Malvales View MSA
124323788 5266 SBM View MSA
124251108 5268 Malvidae View MSA
124061649 5270 Rosid View MSA
123752995 5271 Pentapetalae View MSA
122790046 5272 Eudicot View MSA
122051496 5273 Angiosperm View MSA
121350050 5274 Embryophyte View MSA
123424396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain