Gene : Cagra.6748s0005 C. grandiflora v1.1
Defline:  (1 of 16) PF04576 - Zein-binding (Zein-binding) Genomic Order:  5
Name:  ? Cagra.6748s0005 Secondary Identifier:  ? PAC:28912488
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6748s0005 0.5kb upstream 0.5kb upstream 3093 true Scaffold6748: 18665-21757 Capsella grandiflora
Cagra.6748s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold6748: 18665-19164 Capsella grandiflora
Cagra.6748s0005 0.5kb downstream 0.5kb downstream 3093 true Scaffold6748: 19165-22257 Capsella grandiflora
Cagra.6748s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold6748: 21758-22257 Capsella grandiflora
Cagra.6748s0005 1.0kb upstream 1.0kb upstream 3593 true Scaffold6748: 18165-21757 Capsella grandiflora
Cagra.6748s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold6748: 18165-19164 Capsella grandiflora
Cagra.6748s0005 1.0kb downstream 1.0kb downstream 3593 true Scaffold6748: 19165-22757 Capsella grandiflora
Cagra.6748s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold6748: 21758-22757 Capsella grandiflora
Cagra.6748s0005 2.0kb upstream 2.0kb upstream 4593 true Scaffold6748: 17165-21757 Capsella grandiflora
Cagra.6748s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold6748: 17165-19164 Capsella grandiflora
Cagra.6748s0005 2.0kb downstream 2.0kb downstream 4593 true Scaffold6748: 19165-23757 Capsella grandiflora
Cagra.6748s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold6748: 21758-23757 Capsella grandiflora
Cagra.6748s0005 5.0kb upstream 5.0kb upstream 7593 true Scaffold6748: 14165-21757 Capsella grandiflora
Cagra.6748s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold6748: 14165-19164 Capsella grandiflora
Cagra.6748s0005 5.0kb downstream 5.0kb downstream 7593 true Scaffold6748: 19165-26757 Capsella grandiflora
Cagra.6748s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold6748: 21758-26757 Capsella grandiflora
Cagra.6748s0005 10.0kb upstream 10.0kb upstream 12593 true Scaffold6748: 9165-21757 Capsella grandiflora
Cagra.6748s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold6748: 9165-19164 Capsella grandiflora
Cagra.6748s0005 10.0kb downstream 10.0kb downstream 12593 true Scaffold6748: 19165-31757 Capsella grandiflora
Cagra.6748s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold6748: 21758-31757 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369555 5261 Brassicaceae View MSA
123835177 5264 Brassicales-Malvales View MSA
124345175 5266 SBM View MSA
124254550 5268 Malvidae View MSA
124068761 5270 Rosid View MSA
123746537 5271 Pentapetalae View MSA
122795309 5272 Eudicot View MSA
122048719 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain