Gene : Cagra.6777s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12802:SF39 - SWI/SNF COMPLEX SUBUNIT SWI3D Genomic Order:  8
Name:  ? Cagra.6777s0008 Secondary Identifier:  ? PAC:28894328
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6777s0008 0.5kb upstream 0.5kb upstream 5004 true Scaffold6777: 22298-27301 Capsella grandiflora
Cagra.6777s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold6777: 26802-27301 Capsella grandiflora
Cagra.6777s0008 0.5kb downstream 0.5kb downstream 5004 true Scaffold6777: 21798-26801 Capsella grandiflora
Cagra.6777s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold6777: 21798-22297 Capsella grandiflora
Cagra.6777s0008 1.0kb upstream 1.0kb upstream 5504 true Scaffold6777: 22298-27801 Capsella grandiflora
Cagra.6777s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold6777: 26802-27801 Capsella grandiflora
Cagra.6777s0008 1.0kb downstream 1.0kb downstream 5504 true Scaffold6777: 21298-26801 Capsella grandiflora
Cagra.6777s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold6777: 21298-22297 Capsella grandiflora
Cagra.6777s0008 2.0kb upstream 2.0kb upstream 6504 true Scaffold6777: 22298-28801 Capsella grandiflora
Cagra.6777s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold6777: 26802-28801 Capsella grandiflora
Cagra.6777s0008 2.0kb downstream 2.0kb downstream 6504 true Scaffold6777: 20298-26801 Capsella grandiflora
Cagra.6777s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold6777: 20298-22297 Capsella grandiflora
Cagra.6777s0008 5.0kb upstream 5.0kb upstream 9504 true Scaffold6777: 22298-31801 Capsella grandiflora
Cagra.6777s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold6777: 26802-31801 Capsella grandiflora
Cagra.6777s0008 5.0kb downstream 5.0kb downstream 9504 true Scaffold6777: 17298-26801 Capsella grandiflora
Cagra.6777s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold6777: 17298-22297 Capsella grandiflora
Cagra.6777s0008 10.0kb upstream 10.0kb upstream 14504 true Scaffold6777: 22298-36801 Capsella grandiflora
Cagra.6777s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold6777: 26802-36801 Capsella grandiflora
Cagra.6777s0008 10.0kb downstream 10.0kb downstream 14504 true Scaffold6777: 12298-26801 Capsella grandiflora
Cagra.6777s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold6777: 12298-22297 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375243 5261 Brassicaceae View MSA
123840347 5264 Brassicales-Malvales View MSA
124346471 5266 SBM View MSA
124250870 5268 Malvidae View MSA
124063098 5270 Rosid View MSA
123749102 5271 Pentapetalae View MSA
122792303 5272 Eudicot View MSA
122043104 5273 Angiosperm View MSA
121349137 5274 Embryophyte View MSA
123428437 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain