Gene : Cagra.6777s0021 C. grandiflora v1.1
Defline:  (1 of 12) PF05055 - Protein of unknown function (DUF677) (DUF677) Genomic Order:  21
Name:  ? Cagra.6777s0021 Secondary Identifier:  ? PAC:28894321
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6777s0021 0.5kb upstream 0.5kb upstream 1719 true Scaffold6777: 68196-69914 Capsella grandiflora
Cagra.6777s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold6777: 69415-69914 Capsella grandiflora
Cagra.6777s0021 0.5kb downstream 0.5kb downstream 1719 true Scaffold6777: 67696-69414 Capsella grandiflora
Cagra.6777s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold6777: 67696-68195 Capsella grandiflora
Cagra.6777s0021 1.0kb upstream 1.0kb upstream 2219 true Scaffold6777: 68196-70414 Capsella grandiflora
Cagra.6777s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold6777: 69415-70414 Capsella grandiflora
Cagra.6777s0021 1.0kb downstream 1.0kb downstream 2219 true Scaffold6777: 67196-69414 Capsella grandiflora
Cagra.6777s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold6777: 67196-68195 Capsella grandiflora
Cagra.6777s0021 2.0kb upstream 2.0kb upstream 3219 true Scaffold6777: 68196-71414 Capsella grandiflora
Cagra.6777s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold6777: 69415-71414 Capsella grandiflora
Cagra.6777s0021 2.0kb downstream 2.0kb downstream 3219 true Scaffold6777: 66196-69414 Capsella grandiflora
Cagra.6777s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold6777: 66196-68195 Capsella grandiflora
Cagra.6777s0021 5.0kb upstream 5.0kb upstream 6219 true Scaffold6777: 68196-74414 Capsella grandiflora
Cagra.6777s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold6777: 69415-74414 Capsella grandiflora
Cagra.6777s0021 5.0kb downstream 5.0kb downstream 6219 true Scaffold6777: 63196-69414 Capsella grandiflora
Cagra.6777s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold6777: 63196-68195 Capsella grandiflora
Cagra.6777s0021 10.0kb upstream 10.0kb upstream 11219 true Scaffold6777: 68196-79414 Capsella grandiflora
Cagra.6777s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold6777: 69415-79414 Capsella grandiflora
Cagra.6777s0021 10.0kb downstream 10.0kb downstream 11219 true Scaffold6777: 58196-69414 Capsella grandiflora
Cagra.6777s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold6777: 58196-68195 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499398 5273 Angiosperm View MSA
122338030 5261 Brassicaceae View MSA
123778651 5264 Brassicales-Malvales View MSA
124276992 5266 SBM View MSA
124132238 5268 Malvidae View MSA
123860558 5270 Rosid View MSA
123446165 5271 Pentapetalae View MSA
122481718 5272 Eudicot View MSA
120772738 5274 Embryophyte View MSA
122815076 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain