Gene : Cagra.6624s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11615//PTHR11615:SF118 - NITRATE, FROMATE, IRON DEHYDROGENASE Genomic Order:  11
Name:  ? Cagra.6624s0011 Secondary Identifier:  ? PAC:28901149
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6624s0011 0.5kb upstream 0.5kb upstream 1238 true Scaffold6624: 46235-47472 Capsella grandiflora
Cagra.6624s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold6624: 46235-46734 Capsella grandiflora
Cagra.6624s0011 0.5kb downstream 0.5kb downstream 1238 true Scaffold6624: 46735-47972 Capsella grandiflora
Cagra.6624s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold6624: 47473-47972 Capsella grandiflora
Cagra.6624s0011 1.0kb upstream 1.0kb upstream 1738 true Scaffold6624: 45735-47472 Capsella grandiflora
Cagra.6624s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold6624: 45735-46734 Capsella grandiflora
Cagra.6624s0011 1.0kb downstream 1.0kb downstream 1738 true Scaffold6624: 46735-48472 Capsella grandiflora
Cagra.6624s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold6624: 47473-48472 Capsella grandiflora
Cagra.6624s0011 2.0kb upstream 2.0kb upstream 2738 true Scaffold6624: 44735-47472 Capsella grandiflora
Cagra.6624s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold6624: 44735-46734 Capsella grandiflora
Cagra.6624s0011 2.0kb downstream 2.0kb downstream 2738 true Scaffold6624: 46735-49472 Capsella grandiflora
Cagra.6624s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold6624: 47473-49472 Capsella grandiflora
Cagra.6624s0011 5.0kb upstream 5.0kb upstream 5738 true Scaffold6624: 41735-47472 Capsella grandiflora
Cagra.6624s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold6624: 41735-46734 Capsella grandiflora
Cagra.6624s0011 5.0kb downstream 5.0kb downstream 5738 true Scaffold6624: 46735-52472 Capsella grandiflora
Cagra.6624s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold6624: 47473-52472 Capsella grandiflora
Cagra.6624s0011 10.0kb upstream 10.0kb upstream 10738 true Scaffold6624: 36735-47472 Capsella grandiflora
Cagra.6624s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold6624: 36735-46734 Capsella grandiflora
Cagra.6624s0011 10.0kb downstream 10.0kb downstream 10738 true Scaffold6624: 46735-57472 Capsella grandiflora
Cagra.6624s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold6624: 47473-57472 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360744 5261 Brassicaceae View MSA
123829051 5264 Brassicales-Malvales View MSA
124343904 5266 SBM View MSA
124243184 5268 Malvidae View MSA
124065281 5270 Rosid View MSA
123748038 5271 Pentapetalae View MSA
122791744 5272 Eudicot View MSA
122049274 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain