Gene : Cagra.6624s0017 C. grandiflora v1.1
Defline:  (1 of 2) PTHR19139:SF99 - AQUAPORIN TIP2-1 Genomic Order:  17
Name:  ? Cagra.6624s0017 Secondary Identifier:  ? PAC:28901165
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6624s0017 0.5kb upstream 0.5kb upstream 1935 true Scaffold6624: 67568-69502 Capsella grandiflora
Cagra.6624s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold6624: 69003-69502 Capsella grandiflora
Cagra.6624s0017 0.5kb downstream 0.5kb downstream 1935 true Scaffold6624: 67068-69002 Capsella grandiflora
Cagra.6624s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold6624: 67068-67567 Capsella grandiflora
Cagra.6624s0017 1.0kb upstream 1.0kb upstream 2435 true Scaffold6624: 67568-70002 Capsella grandiflora
Cagra.6624s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold6624: 69003-70002 Capsella grandiflora
Cagra.6624s0017 1.0kb downstream 1.0kb downstream 2435 true Scaffold6624: 66568-69002 Capsella grandiflora
Cagra.6624s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold6624: 66568-67567 Capsella grandiflora
Cagra.6624s0017 2.0kb upstream 2.0kb upstream 3435 true Scaffold6624: 67568-71002 Capsella grandiflora
Cagra.6624s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold6624: 69003-71002 Capsella grandiflora
Cagra.6624s0017 2.0kb downstream 2.0kb downstream 3435 true Scaffold6624: 65568-69002 Capsella grandiflora
Cagra.6624s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold6624: 65568-67567 Capsella grandiflora
Cagra.6624s0017 5.0kb upstream 5.0kb upstream 6435 true Scaffold6624: 67568-74002 Capsella grandiflora
Cagra.6624s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold6624: 69003-74002 Capsella grandiflora
Cagra.6624s0017 5.0kb downstream 5.0kb downstream 6435 true Scaffold6624: 62568-69002 Capsella grandiflora
Cagra.6624s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold6624: 62568-67567 Capsella grandiflora
Cagra.6624s0017 10.0kb upstream 10.0kb upstream 11435 true Scaffold6624: 67568-79002 Capsella grandiflora
Cagra.6624s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold6624: 69003-79002 Capsella grandiflora
Cagra.6624s0017 10.0kb downstream 10.0kb downstream 11435 true Scaffold6624: 57568-69002 Capsella grandiflora
Cagra.6624s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold6624: 57568-67567 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376643 5261 Brassicaceae View MSA
123840512 5264 Brassicales-Malvales View MSA
124342076 5266 SBM View MSA
124253497 5268 Malvidae View MSA
124068633 5270 Rosid View MSA
123744142 5271 Pentapetalae View MSA
122790430 5272 Eudicot View MSA
122045007 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain