Gene : Cagra.6641s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23346:SF19 - PROTEASOME-ASSOCIATED PROTEIN ECM29 HOMOLOG Genomic Order:  1
Name:  ? Cagra.6641s0001 Secondary Identifier:  ? PAC:28907573
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6641s0001 0.5kb upstream 0.5kb upstream 10952 true Scaffold6641: 1-10952 Capsella grandiflora
Cagra.6641s0001 0.5kb upstream 0.5kb upstream 234 false Scaffold6641: 1-234 Capsella grandiflora
Cagra.6641s0001 0.5kb downstream 0.5kb downstream 11218 true Scaffold6641: 235-11452 Capsella grandiflora
Cagra.6641s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold6641: 10953-11452 Capsella grandiflora
Cagra.6641s0001 1.0kb upstream 1.0kb upstream 10952 true Scaffold6641: 1-10952 Capsella grandiflora
Cagra.6641s0001 1.0kb upstream 1.0kb upstream 234 false Scaffold6641: 1-234 Capsella grandiflora
Cagra.6641s0001 1.0kb downstream 1.0kb downstream 11718 true Scaffold6641: 235-11952 Capsella grandiflora
Cagra.6641s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold6641: 10953-11952 Capsella grandiflora
Cagra.6641s0001 2.0kb upstream 2.0kb upstream 10952 true Scaffold6641: 1-10952 Capsella grandiflora
Cagra.6641s0001 2.0kb upstream 2.0kb upstream 234 false Scaffold6641: 1-234 Capsella grandiflora
Cagra.6641s0001 2.0kb downstream 2.0kb downstream 12718 true Scaffold6641: 235-12952 Capsella grandiflora
Cagra.6641s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold6641: 10953-12952 Capsella grandiflora
Cagra.6641s0001 5.0kb upstream 5.0kb upstream 10952 true Scaffold6641: 1-10952 Capsella grandiflora
Cagra.6641s0001 5.0kb upstream 5.0kb upstream 234 false Scaffold6641: 1-234 Capsella grandiflora
Cagra.6641s0001 5.0kb downstream 5.0kb downstream 15718 true Scaffold6641: 235-15952 Capsella grandiflora
Cagra.6641s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold6641: 10953-15952 Capsella grandiflora
Cagra.6641s0001 10.0kb upstream 10.0kb upstream 10952 true Scaffold6641: 1-10952 Capsella grandiflora
Cagra.6641s0001 10.0kb upstream 10.0kb upstream 234 false Scaffold6641: 1-234 Capsella grandiflora
Cagra.6641s0001 10.0kb downstream 10.0kb downstream 16357 true Scaffold6641: 235-16591 Capsella grandiflora
Cagra.6641s0001 10.0kb downstream 10.0kb downstream 5639 false Scaffold6641: 10953-16591 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372003 5261 Brassicaceae View MSA
123828879 5264 Brassicales-Malvales View MSA
124339532 5266 SBM View MSA
124239075 5268 Malvidae View MSA
124060426 5270 Rosid View MSA
123740160 5271 Pentapetalae View MSA
122788135 5272 Eudicot View MSA
122042594 5273 Angiosperm View MSA
121344548 5274 Embryophyte View MSA
123425052 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain