Gene : Cagra.6664s0003 C. grandiflora v1.1
Defline:  (1 of 48) PF14365 - Domain of unknown function (DUF4409) (DUF4409) Genomic Order:  3
Name:  ? Cagra.6664s0003 Secondary Identifier:  ? PAC:28917277
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6664s0003 0.5kb upstream 0.5kb upstream 2310 true Scaffold6664: 6077-8386 Capsella grandiflora
Cagra.6664s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold6664: 6077-6576 Capsella grandiflora
Cagra.6664s0003 0.5kb downstream 0.5kb downstream 2310 true Scaffold6664: 6577-8886 Capsella grandiflora
Cagra.6664s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold6664: 8387-8886 Capsella grandiflora
Cagra.6664s0003 1.0kb upstream 1.0kb upstream 2810 true Scaffold6664: 5577-8386 Capsella grandiflora
Cagra.6664s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold6664: 5577-6576 Capsella grandiflora
Cagra.6664s0003 1.0kb downstream 1.0kb downstream 2810 true Scaffold6664: 6577-9386 Capsella grandiflora
Cagra.6664s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold6664: 8387-9386 Capsella grandiflora
Cagra.6664s0003 2.0kb upstream 2.0kb upstream 3810 true Scaffold6664: 4577-8386 Capsella grandiflora
Cagra.6664s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold6664: 4577-6576 Capsella grandiflora
Cagra.6664s0003 2.0kb downstream 2.0kb downstream 3810 true Scaffold6664: 6577-10386 Capsella grandiflora
Cagra.6664s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold6664: 8387-10386 Capsella grandiflora
Cagra.6664s0003 5.0kb upstream 5.0kb upstream 6810 true Scaffold6664: 1577-8386 Capsella grandiflora
Cagra.6664s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold6664: 1577-6576 Capsella grandiflora
Cagra.6664s0003 5.0kb downstream 5.0kb downstream 6810 true Scaffold6664: 6577-13386 Capsella grandiflora
Cagra.6664s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold6664: 8387-13386 Capsella grandiflora
Cagra.6664s0003 10.0kb upstream 10.0kb upstream 8386 true Scaffold6664: 1-8386 Capsella grandiflora
Cagra.6664s0003 10.0kb upstream 10.0kb upstream 6576 false Scaffold6664: 1-6576 Capsella grandiflora
Cagra.6664s0003 10.0kb downstream 10.0kb downstream 11810 true Scaffold6664: 6577-18386 Capsella grandiflora
Cagra.6664s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold6664: 8387-18386 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375763 5261 Brassicaceae View MSA
123838351 5264 Brassicales-Malvales View MSA
124350658 5266 SBM View MSA
124181106 5268 Malvidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain