Gene : Cagra.6508s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24093:SF262 - CALCIUM-TRANSPORTING ATPASE 2, PLASMA MEMBRANE-TYPE-RELATED Genomic Order:  2
Name:  ? Cagra.6508s0002 Secondary Identifier:  ? PAC:28904387
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6508s0002 0.5kb upstream 0.5kb upstream 4748 true Scaffold6508: 4293-9040 Capsella grandiflora
Cagra.6508s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold6508: 8541-9040 Capsella grandiflora
Cagra.6508s0002 0.5kb downstream 0.5kb downstream 4748 true Scaffold6508: 3793-8540 Capsella grandiflora
Cagra.6508s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold6508: 3793-4292 Capsella grandiflora
Cagra.6508s0002 1.0kb upstream 1.0kb upstream 5248 true Scaffold6508: 4293-9540 Capsella grandiflora
Cagra.6508s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold6508: 8541-9540 Capsella grandiflora
Cagra.6508s0002 1.0kb downstream 1.0kb downstream 5248 true Scaffold6508: 3293-8540 Capsella grandiflora
Cagra.6508s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold6508: 3293-4292 Capsella grandiflora
Cagra.6508s0002 2.0kb upstream 2.0kb upstream 6248 true Scaffold6508: 4293-10540 Capsella grandiflora
Cagra.6508s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold6508: 8541-10540 Capsella grandiflora
Cagra.6508s0002 2.0kb downstream 2.0kb downstream 6248 true Scaffold6508: 2293-8540 Capsella grandiflora
Cagra.6508s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold6508: 2293-4292 Capsella grandiflora
Cagra.6508s0002 5.0kb upstream 5.0kb upstream 9248 true Scaffold6508: 4293-13540 Capsella grandiflora
Cagra.6508s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold6508: 8541-13540 Capsella grandiflora
Cagra.6508s0002 5.0kb downstream 5.0kb downstream 8540 true Scaffold6508: 1-8540 Capsella grandiflora
Cagra.6508s0002 5.0kb downstream 5.0kb downstream 4292 false Scaffold6508: 1-4292 Capsella grandiflora
Cagra.6508s0002 10.0kb upstream 10.0kb upstream 11236 true Scaffold6508: 4293-15528 Capsella grandiflora
Cagra.6508s0002 10.0kb upstream 10.0kb upstream 6988 false Scaffold6508: 8541-15528 Capsella grandiflora
Cagra.6508s0002 10.0kb downstream 10.0kb downstream 8540 true Scaffold6508: 1-8540 Capsella grandiflora
Cagra.6508s0002 10.0kb downstream 10.0kb downstream 4292 false Scaffold6508: 1-4292 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372277 5261 Brassicaceae View MSA
123839604 5264 Brassicales-Malvales View MSA
124343745 5266 SBM View MSA
124238612 5268 Malvidae View MSA
124067452 5270 Rosid View MSA
123746765 5271 Pentapetalae View MSA
122788343 5272 Eudicot View MSA
122047165 5273 Angiosperm View MSA
121349207 5274 Embryophyte View MSA
123428805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain