Gene : Cagra.6594s0017 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24055:SF227 - MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED Genomic Order:  17
Name:  ? Cagra.6594s0017 Secondary Identifier:  ? PAC:28900890
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6594s0017 0.5kb upstream 0.5kb upstream 2616 true Scaffold6594: 69986-72601 Capsella grandiflora
Cagra.6594s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold6594: 72102-72601 Capsella grandiflora
Cagra.6594s0017 0.5kb downstream 0.5kb downstream 2616 true Scaffold6594: 69486-72101 Capsella grandiflora
Cagra.6594s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold6594: 69486-69985 Capsella grandiflora
Cagra.6594s0017 1.0kb upstream 1.0kb upstream 3116 true Scaffold6594: 69986-73101 Capsella grandiflora
Cagra.6594s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold6594: 72102-73101 Capsella grandiflora
Cagra.6594s0017 1.0kb downstream 1.0kb downstream 3116 true Scaffold6594: 68986-72101 Capsella grandiflora
Cagra.6594s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold6594: 68986-69985 Capsella grandiflora
Cagra.6594s0017 2.0kb upstream 2.0kb upstream 4116 true Scaffold6594: 69986-74101 Capsella grandiflora
Cagra.6594s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold6594: 72102-74101 Capsella grandiflora
Cagra.6594s0017 2.0kb downstream 2.0kb downstream 4116 true Scaffold6594: 67986-72101 Capsella grandiflora
Cagra.6594s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold6594: 67986-69985 Capsella grandiflora
Cagra.6594s0017 5.0kb upstream 5.0kb upstream 7116 true Scaffold6594: 69986-77101 Capsella grandiflora
Cagra.6594s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold6594: 72102-77101 Capsella grandiflora
Cagra.6594s0017 5.0kb downstream 5.0kb downstream 7116 true Scaffold6594: 64986-72101 Capsella grandiflora
Cagra.6594s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold6594: 64986-69985 Capsella grandiflora
Cagra.6594s0017 10.0kb upstream 10.0kb upstream 12116 true Scaffold6594: 69986-82101 Capsella grandiflora
Cagra.6594s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold6594: 72102-82101 Capsella grandiflora
Cagra.6594s0017 10.0kb downstream 10.0kb downstream 12116 true Scaffold6594: 59986-72101 Capsella grandiflora
Cagra.6594s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold6594: 59986-69985 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380799 5261 Brassicaceae View MSA
123834465 5264 Brassicales-Malvales View MSA
124345432 5266 SBM View MSA
124238945 5268 Malvidae View MSA
124061273 5270 Rosid View MSA
123742967 5271 Pentapetalae View MSA
122787309 5272 Eudicot View MSA
122048808 5273 Angiosperm View MSA
121344775 5274 Embryophyte View MSA
123428294 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain