Gene : Cagra.6617s0006 C. grandiflora v1.1
Defline:  (1 of 6) PTHR11141 - PROTEIN TRANSPORT PROTEIN SEC23 Genomic Order:  6
Name:  ? Cagra.6617s0006 Secondary Identifier:  ? PAC:28917739
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6617s0006 0.5kb upstream 0.5kb upstream 6126 true Scaffold6617: 20846-26971 Capsella grandiflora
Cagra.6617s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold6617: 26472-26971 Capsella grandiflora
Cagra.6617s0006 0.5kb downstream 0.5kb downstream 6126 true Scaffold6617: 20346-26471 Capsella grandiflora
Cagra.6617s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold6617: 20346-20845 Capsella grandiflora
Cagra.6617s0006 1.0kb upstream 1.0kb upstream 6626 true Scaffold6617: 20846-27471 Capsella grandiflora
Cagra.6617s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold6617: 26472-27471 Capsella grandiflora
Cagra.6617s0006 1.0kb downstream 1.0kb downstream 6626 true Scaffold6617: 19846-26471 Capsella grandiflora
Cagra.6617s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold6617: 19846-20845 Capsella grandiflora
Cagra.6617s0006 2.0kb upstream 2.0kb upstream 7626 true Scaffold6617: 20846-28471 Capsella grandiflora
Cagra.6617s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold6617: 26472-28471 Capsella grandiflora
Cagra.6617s0006 2.0kb downstream 2.0kb downstream 7626 true Scaffold6617: 18846-26471 Capsella grandiflora
Cagra.6617s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold6617: 18846-20845 Capsella grandiflora
Cagra.6617s0006 5.0kb upstream 5.0kb upstream 10626 true Scaffold6617: 20846-31471 Capsella grandiflora
Cagra.6617s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold6617: 26472-31471 Capsella grandiflora
Cagra.6617s0006 5.0kb downstream 5.0kb downstream 10626 true Scaffold6617: 15846-26471 Capsella grandiflora
Cagra.6617s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold6617: 15846-20845 Capsella grandiflora
Cagra.6617s0006 10.0kb upstream 10.0kb upstream 15626 true Scaffold6617: 20846-36471 Capsella grandiflora
Cagra.6617s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold6617: 26472-36471 Capsella grandiflora
Cagra.6617s0006 10.0kb downstream 10.0kb downstream 15626 true Scaffold6617: 10846-26471 Capsella grandiflora
Cagra.6617s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold6617: 10846-20845 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372524 5261 Brassicaceae View MSA
123841639 5264 Brassicales-Malvales View MSA
124342818 5266 SBM View MSA
124240770 5268 Malvidae View MSA
124061979 5270 Rosid View MSA
123740886 5271 Pentapetalae View MSA
122793280 5272 Eudicot View MSA
122046887 5273 Angiosperm View MSA
121348482 5274 Embryophyte View MSA
123424383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain