Gene : Cagra.6622s0001 C. grandiflora v1.1
Defline:  (1 of 16) PF04576 - Zein-binding (Zein-binding) Genomic Order:  1
Name:  ? Cagra.6622s0001 Secondary Identifier:  ? PAC:28918186
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6622s0001 0.5kb upstream 0.5kb upstream 2872 true Scaffold6622: 3054-5925 Capsella grandiflora
Cagra.6622s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold6622: 3054-3553 Capsella grandiflora
Cagra.6622s0001 0.5kb downstream 0.5kb downstream 2872 true Scaffold6622: 3554-6425 Capsella grandiflora
Cagra.6622s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold6622: 5926-6425 Capsella grandiflora
Cagra.6622s0001 1.0kb upstream 1.0kb upstream 3372 true Scaffold6622: 2554-5925 Capsella grandiflora
Cagra.6622s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold6622: 2554-3553 Capsella grandiflora
Cagra.6622s0001 1.0kb downstream 1.0kb downstream 3372 true Scaffold6622: 3554-6925 Capsella grandiflora
Cagra.6622s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold6622: 5926-6925 Capsella grandiflora
Cagra.6622s0001 2.0kb upstream 2.0kb upstream 4372 true Scaffold6622: 1554-5925 Capsella grandiflora
Cagra.6622s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold6622: 1554-3553 Capsella grandiflora
Cagra.6622s0001 2.0kb downstream 2.0kb downstream 4372 true Scaffold6622: 3554-7925 Capsella grandiflora
Cagra.6622s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold6622: 5926-7925 Capsella grandiflora
Cagra.6622s0001 5.0kb upstream 5.0kb upstream 5925 true Scaffold6622: 1-5925 Capsella grandiflora
Cagra.6622s0001 5.0kb upstream 5.0kb upstream 3553 false Scaffold6622: 1-3553 Capsella grandiflora
Cagra.6622s0001 5.0kb downstream 5.0kb downstream 7372 true Scaffold6622: 3554-10925 Capsella grandiflora
Cagra.6622s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold6622: 5926-10925 Capsella grandiflora
Cagra.6622s0001 10.0kb upstream 10.0kb upstream 5925 true Scaffold6622: 1-5925 Capsella grandiflora
Cagra.6622s0001 10.0kb upstream 10.0kb upstream 3553 false Scaffold6622: 1-3553 Capsella grandiflora
Cagra.6622s0001 10.0kb downstream 10.0kb downstream 12372 true Scaffold6622: 3554-15925 Capsella grandiflora
Cagra.6622s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold6622: 5926-15925 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375963 5261 Brassicaceae View MSA
123838989 5264 Brassicales-Malvales View MSA
124350144 5266 SBM View MSA
124251951 5268 Malvidae View MSA
124071861 5270 Rosid View MSA
123744785 5271 Pentapetalae View MSA
122794145 5272 Eudicot View MSA
122050916 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain