Gene : Cagra.6617s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31062:SF34 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 15-RELATED Genomic Order:  9
Name:  ? Cagra.6617s0009 Secondary Identifier:  ? PAC:28917725
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6617s0009 0.5kb upstream 0.5kb upstream 1898 true Scaffold6617: 33180-35077 Capsella grandiflora
Cagra.6617s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold6617: 33180-33679 Capsella grandiflora
Cagra.6617s0009 0.5kb downstream 0.5kb downstream 1898 true Scaffold6617: 33680-35577 Capsella grandiflora
Cagra.6617s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold6617: 35078-35577 Capsella grandiflora
Cagra.6617s0009 1.0kb upstream 1.0kb upstream 2398 true Scaffold6617: 32680-35077 Capsella grandiflora
Cagra.6617s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold6617: 32680-33679 Capsella grandiflora
Cagra.6617s0009 1.0kb downstream 1.0kb downstream 2398 true Scaffold6617: 33680-36077 Capsella grandiflora
Cagra.6617s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold6617: 35078-36077 Capsella grandiflora
Cagra.6617s0009 2.0kb upstream 2.0kb upstream 3398 true Scaffold6617: 31680-35077 Capsella grandiflora
Cagra.6617s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold6617: 31680-33679 Capsella grandiflora
Cagra.6617s0009 2.0kb downstream 2.0kb downstream 3398 true Scaffold6617: 33680-37077 Capsella grandiflora
Cagra.6617s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold6617: 35078-37077 Capsella grandiflora
Cagra.6617s0009 5.0kb upstream 5.0kb upstream 6398 true Scaffold6617: 28680-35077 Capsella grandiflora
Cagra.6617s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold6617: 28680-33679 Capsella grandiflora
Cagra.6617s0009 5.0kb downstream 5.0kb downstream 6398 true Scaffold6617: 33680-40077 Capsella grandiflora
Cagra.6617s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold6617: 35078-40077 Capsella grandiflora
Cagra.6617s0009 10.0kb upstream 10.0kb upstream 11398 true Scaffold6617: 23680-35077 Capsella grandiflora
Cagra.6617s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold6617: 23680-33679 Capsella grandiflora
Cagra.6617s0009 10.0kb downstream 10.0kb downstream 11398 true Scaffold6617: 33680-45077 Capsella grandiflora
Cagra.6617s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold6617: 35078-45077 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371748 5261 Brassicaceae View MSA
123838482 5264 Brassicales-Malvales View MSA
124350523 5266 SBM View MSA
124248515 5268 Malvidae View MSA
124074397 5270 Rosid View MSA
123749278 5271 Pentapetalae View MSA
122796709 5272 Eudicot View MSA
122046395 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain