Gene : Cagra.9514s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10366//PTHR10366:SF355 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  3
Name:  ? Cagra.9514s0003 Secondary Identifier:  ? PAC:28900641
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9514s0003 0.5kb upstream 0.5kb upstream 1636 true Scaffold9514: 4327-5962 Capsella grandiflora
Cagra.9514s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold9514: 4327-4826 Capsella grandiflora
Cagra.9514s0003 0.5kb downstream 0.5kb downstream 1636 true Scaffold9514: 4827-6462 Capsella grandiflora
Cagra.9514s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold9514: 5963-6462 Capsella grandiflora
Cagra.9514s0003 1.0kb upstream 1.0kb upstream 2136 true Scaffold9514: 3827-5962 Capsella grandiflora
Cagra.9514s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold9514: 3827-4826 Capsella grandiflora
Cagra.9514s0003 1.0kb downstream 1.0kb downstream 2136 true Scaffold9514: 4827-6962 Capsella grandiflora
Cagra.9514s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold9514: 5963-6962 Capsella grandiflora
Cagra.9514s0003 2.0kb upstream 2.0kb upstream 3136 true Scaffold9514: 2827-5962 Capsella grandiflora
Cagra.9514s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold9514: 2827-4826 Capsella grandiflora
Cagra.9514s0003 2.0kb downstream 2.0kb downstream 3136 true Scaffold9514: 4827-7962 Capsella grandiflora
Cagra.9514s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold9514: 5963-7962 Capsella grandiflora
Cagra.9514s0003 5.0kb upstream 5.0kb upstream 5962 true Scaffold9514: 1-5962 Capsella grandiflora
Cagra.9514s0003 5.0kb upstream 5.0kb upstream 4826 false Scaffold9514: 1-4826 Capsella grandiflora
Cagra.9514s0003 5.0kb downstream 5.0kb downstream 6136 true Scaffold9514: 4827-10962 Capsella grandiflora
Cagra.9514s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold9514: 5963-10962 Capsella grandiflora
Cagra.9514s0003 10.0kb upstream 10.0kb upstream 5962 true Scaffold9514: 1-5962 Capsella grandiflora
Cagra.9514s0003 10.0kb upstream 10.0kb upstream 4826 false Scaffold9514: 1-4826 Capsella grandiflora
Cagra.9514s0003 10.0kb downstream 10.0kb downstream 10759 true Scaffold9514: 4827-15585 Capsella grandiflora
Cagra.9514s0003 10.0kb downstream 10.0kb downstream 9623 false Scaffold9514: 5963-15585 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791948 5273 Angiosperm View MSA
122334516 5261 Brassicaceae Singleton cluster - no MSA
123775342 5264 Brassicales-Malvales Singleton cluster - no MSA
124273752 5266 SBM Singleton cluster - no MSA
124255563 5268 Malvidae View MSA
123953219 5270 Rosid View MSA
123530688 5271 Pentapetalae View MSA
122795538 5272 Eudicot View MSA
121063215 5274 Embryophyte View MSA
123427810 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain