Gene : Cagra.9536s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR28141:SF1 - 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE Genomic Order:  1
Name:  ? Cagra.9536s0001 Secondary Identifier:  ? PAC:28896590
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9536s0001 0.5kb upstream 0.5kb upstream 1896 true Scaffold9536: 246-2141 Capsella grandiflora
Cagra.9536s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold9536: 246-745 Capsella grandiflora
Cagra.9536s0001 0.5kb downstream 0.5kb downstream 1896 true Scaffold9536: 746-2641 Capsella grandiflora
Cagra.9536s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold9536: 2142-2641 Capsella grandiflora
Cagra.9536s0001 1.0kb upstream 1.0kb upstream 2141 true Scaffold9536: 1-2141 Capsella grandiflora
Cagra.9536s0001 1.0kb upstream 1.0kb upstream 745 false Scaffold9536: 1-745 Capsella grandiflora
Cagra.9536s0001 1.0kb downstream 1.0kb downstream 2396 true Scaffold9536: 746-3141 Capsella grandiflora
Cagra.9536s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold9536: 2142-3141 Capsella grandiflora
Cagra.9536s0001 2.0kb upstream 2.0kb upstream 2141 true Scaffold9536: 1-2141 Capsella grandiflora
Cagra.9536s0001 2.0kb upstream 2.0kb upstream 745 false Scaffold9536: 1-745 Capsella grandiflora
Cagra.9536s0001 2.0kb downstream 2.0kb downstream 3396 true Scaffold9536: 746-4141 Capsella grandiflora
Cagra.9536s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold9536: 2142-4141 Capsella grandiflora
Cagra.9536s0001 5.0kb upstream 5.0kb upstream 2141 true Scaffold9536: 1-2141 Capsella grandiflora
Cagra.9536s0001 5.0kb upstream 5.0kb upstream 745 false Scaffold9536: 1-745 Capsella grandiflora
Cagra.9536s0001 5.0kb downstream 5.0kb downstream 6396 true Scaffold9536: 746-7141 Capsella grandiflora
Cagra.9536s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold9536: 2142-7141 Capsella grandiflora
Cagra.9536s0001 10.0kb upstream 10.0kb upstream 2141 true Scaffold9536: 1-2141 Capsella grandiflora
Cagra.9536s0001 10.0kb upstream 10.0kb upstream 745 false Scaffold9536: 1-745 Capsella grandiflora
Cagra.9536s0001 10.0kb downstream 10.0kb downstream 11396 true Scaffold9536: 746-12141 Capsella grandiflora
Cagra.9536s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold9536: 2142-12141 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374625 5261 Brassicaceae View MSA
123836138 5264 Brassicales-Malvales View MSA
124339777 5266 SBM View MSA
124240345 5268 Malvidae View MSA
124065513 5270 Rosid View MSA
123741302 5271 Pentapetalae View MSA
122793487 5272 Eudicot View MSA
122041561 5273 Angiosperm View MSA
123429145 5275 Viridiplantae View MSA
121349919 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain