Gene : Cagra.9536s0017 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 Genomic Order:  17
Name:  ? Cagra.9536s0017 Secondary Identifier:  ? PAC:28896593
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9536s0017 0.5kb upstream 0.5kb upstream 6682 true Scaffold9536: 56457-63138 Capsella grandiflora
Cagra.9536s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold9536: 62639-63138 Capsella grandiflora
Cagra.9536s0017 0.5kb downstream 0.5kb downstream 6682 true Scaffold9536: 55957-62638 Capsella grandiflora
Cagra.9536s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold9536: 55957-56456 Capsella grandiflora
Cagra.9536s0017 1.0kb upstream 1.0kb upstream 7182 true Scaffold9536: 56457-63638 Capsella grandiflora
Cagra.9536s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold9536: 62639-63638 Capsella grandiflora
Cagra.9536s0017 1.0kb downstream 1.0kb downstream 7182 true Scaffold9536: 55457-62638 Capsella grandiflora
Cagra.9536s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold9536: 55457-56456 Capsella grandiflora
Cagra.9536s0017 2.0kb upstream 2.0kb upstream 8182 true Scaffold9536: 56457-64638 Capsella grandiflora
Cagra.9536s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold9536: 62639-64638 Capsella grandiflora
Cagra.9536s0017 2.0kb downstream 2.0kb downstream 8182 true Scaffold9536: 54457-62638 Capsella grandiflora
Cagra.9536s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold9536: 54457-56456 Capsella grandiflora
Cagra.9536s0017 5.0kb upstream 5.0kb upstream 11182 true Scaffold9536: 56457-67638 Capsella grandiflora
Cagra.9536s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold9536: 62639-67638 Capsella grandiflora
Cagra.9536s0017 5.0kb downstream 5.0kb downstream 11182 true Scaffold9536: 51457-62638 Capsella grandiflora
Cagra.9536s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold9536: 51457-56456 Capsella grandiflora
Cagra.9536s0017 10.0kb upstream 10.0kb upstream 16182 true Scaffold9536: 56457-72638 Capsella grandiflora
Cagra.9536s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold9536: 62639-72638 Capsella grandiflora
Cagra.9536s0017 10.0kb downstream 10.0kb downstream 16182 true Scaffold9536: 46457-62638 Capsella grandiflora
Cagra.9536s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold9536: 46457-56456 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363867 5261 Brassicaceae View MSA
123837020 5264 Brassicales-Malvales View MSA
124339385 5266 SBM View MSA
124241130 5268 Malvidae View MSA
124064878 5270 Rosid View MSA
123737179 5271 Pentapetalae View MSA
122789263 5272 Eudicot View MSA
122042649 5273 Angiosperm View MSA
121346561 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain