Gene : Cagra.9568s0004 C. grandiflora v1.1
Defline:  (1 of 1) PF10382 - Protein of unknown function (DUF2439) (DUF2439) Genomic Order:  4
Name:  ? Cagra.9568s0004 Secondary Identifier:  ? PAC:28906230
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9568s0004 0.5kb upstream 0.5kb upstream 3368 true Scaffold9568: 13039-16406 Capsella grandiflora
Cagra.9568s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold9568: 13039-13538 Capsella grandiflora
Cagra.9568s0004 0.5kb downstream 0.5kb downstream 3368 true Scaffold9568: 13539-16906 Capsella grandiflora
Cagra.9568s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold9568: 16407-16906 Capsella grandiflora
Cagra.9568s0004 1.0kb upstream 1.0kb upstream 3868 true Scaffold9568: 12539-16406 Capsella grandiflora
Cagra.9568s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold9568: 12539-13538 Capsella grandiflora
Cagra.9568s0004 1.0kb downstream 1.0kb downstream 3868 true Scaffold9568: 13539-17406 Capsella grandiflora
Cagra.9568s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold9568: 16407-17406 Capsella grandiflora
Cagra.9568s0004 2.0kb upstream 2.0kb upstream 4868 true Scaffold9568: 11539-16406 Capsella grandiflora
Cagra.9568s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold9568: 11539-13538 Capsella grandiflora
Cagra.9568s0004 2.0kb downstream 2.0kb downstream 4868 true Scaffold9568: 13539-18406 Capsella grandiflora
Cagra.9568s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold9568: 16407-18406 Capsella grandiflora
Cagra.9568s0004 5.0kb upstream 5.0kb upstream 7868 true Scaffold9568: 8539-16406 Capsella grandiflora
Cagra.9568s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold9568: 8539-13538 Capsella grandiflora
Cagra.9568s0004 5.0kb downstream 5.0kb downstream 7868 true Scaffold9568: 13539-21406 Capsella grandiflora
Cagra.9568s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold9568: 16407-21406 Capsella grandiflora
Cagra.9568s0004 10.0kb upstream 10.0kb upstream 12868 true Scaffold9568: 3539-16406 Capsella grandiflora
Cagra.9568s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold9568: 3539-13538 Capsella grandiflora
Cagra.9568s0004 10.0kb downstream 10.0kb downstream 12868 true Scaffold9568: 13539-26406 Capsella grandiflora
Cagra.9568s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold9568: 16407-26406 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510555 5273 Angiosperm View MSA
122365400 5261 Brassicaceae View MSA
123798947 5264 Brassicales-Malvales View MSA
124296519 5266 SBM View MSA
124148648 5268 Malvidae View MSA
123874603 5270 Rosid View MSA
123458550 5271 Pentapetalae View MSA
122493955 5272 Eudicot View MSA
120783648 5274 Embryophyte View MSA
122825632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain