Gene : Cagra.9598s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR30060 - INNER MEMBRANE PROTEIN Genomic Order:  5
Name:  ? Cagra.9598s0005 Secondary Identifier:  ? PAC:28898673
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9598s0005 0.5kb upstream 0.5kb upstream 3189 true Scaffold9598: 13027-16215 Capsella grandiflora
Cagra.9598s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold9598: 15716-16215 Capsella grandiflora
Cagra.9598s0005 0.5kb downstream 0.5kb downstream 3189 true Scaffold9598: 12527-15715 Capsella grandiflora
Cagra.9598s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold9598: 12527-13026 Capsella grandiflora
Cagra.9598s0005 1.0kb upstream 1.0kb upstream 3689 true Scaffold9598: 13027-16715 Capsella grandiflora
Cagra.9598s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold9598: 15716-16715 Capsella grandiflora
Cagra.9598s0005 1.0kb downstream 1.0kb downstream 3689 true Scaffold9598: 12027-15715 Capsella grandiflora
Cagra.9598s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold9598: 12027-13026 Capsella grandiflora
Cagra.9598s0005 2.0kb upstream 2.0kb upstream 4689 true Scaffold9598: 13027-17715 Capsella grandiflora
Cagra.9598s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold9598: 15716-17715 Capsella grandiflora
Cagra.9598s0005 2.0kb downstream 2.0kb downstream 4689 true Scaffold9598: 11027-15715 Capsella grandiflora
Cagra.9598s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold9598: 11027-13026 Capsella grandiflora
Cagra.9598s0005 5.0kb upstream 5.0kb upstream 7689 true Scaffold9598: 13027-20715 Capsella grandiflora
Cagra.9598s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold9598: 15716-20715 Capsella grandiflora
Cagra.9598s0005 5.0kb downstream 5.0kb downstream 7689 true Scaffold9598: 8027-15715 Capsella grandiflora
Cagra.9598s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold9598: 8027-13026 Capsella grandiflora
Cagra.9598s0005 10.0kb upstream 10.0kb upstream 12689 true Scaffold9598: 13027-25715 Capsella grandiflora
Cagra.9598s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold9598: 15716-25715 Capsella grandiflora
Cagra.9598s0005 10.0kb downstream 10.0kb downstream 12689 true Scaffold9598: 3027-15715 Capsella grandiflora
Cagra.9598s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold9598: 3027-13026 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370098 5261 Brassicaceae View MSA
123833460 5264 Brassicales-Malvales View MSA
124340214 5266 SBM View MSA
124243786 5268 Malvidae View MSA
124067754 5270 Rosid View MSA
123748299 5271 Pentapetalae View MSA
122787989 5272 Eudicot View MSA
122042336 5273 Angiosperm View MSA
121346143 5274 Embryophyte View MSA
123426491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain