Gene : Cagra.9217s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12419//PTHR12419:SF19 - OTU DOMAIN CONTAINING PROTEIN Genomic Order:  5
Name:  ? Cagra.9217s0005 Secondary Identifier:  ? PAC:28914549
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9217s0005 0.5kb upstream 0.5kb upstream 3330 true Scaffold9217: 15038-18367 Capsella grandiflora
Cagra.9217s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold9217: 15038-15537 Capsella grandiflora
Cagra.9217s0005 0.5kb downstream 0.5kb downstream 3330 true Scaffold9217: 15538-18867 Capsella grandiflora
Cagra.9217s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold9217: 18368-18867 Capsella grandiflora
Cagra.9217s0005 1.0kb upstream 1.0kb upstream 3830 true Scaffold9217: 14538-18367 Capsella grandiflora
Cagra.9217s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold9217: 14538-15537 Capsella grandiflora
Cagra.9217s0005 1.0kb downstream 1.0kb downstream 3830 true Scaffold9217: 15538-19367 Capsella grandiflora
Cagra.9217s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold9217: 18368-19367 Capsella grandiflora
Cagra.9217s0005 2.0kb upstream 2.0kb upstream 4830 true Scaffold9217: 13538-18367 Capsella grandiflora
Cagra.9217s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold9217: 13538-15537 Capsella grandiflora
Cagra.9217s0005 2.0kb downstream 2.0kb downstream 4830 true Scaffold9217: 15538-20367 Capsella grandiflora
Cagra.9217s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold9217: 18368-20367 Capsella grandiflora
Cagra.9217s0005 5.0kb upstream 5.0kb upstream 7830 true Scaffold9217: 10538-18367 Capsella grandiflora
Cagra.9217s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold9217: 10538-15537 Capsella grandiflora
Cagra.9217s0005 5.0kb downstream 5.0kb downstream 7830 true Scaffold9217: 15538-23367 Capsella grandiflora
Cagra.9217s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold9217: 18368-23367 Capsella grandiflora
Cagra.9217s0005 10.0kb upstream 10.0kb upstream 12830 true Scaffold9217: 5538-18367 Capsella grandiflora
Cagra.9217s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold9217: 5538-15537 Capsella grandiflora
Cagra.9217s0005 10.0kb downstream 10.0kb downstream 12830 true Scaffold9217: 15538-28367 Capsella grandiflora
Cagra.9217s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold9217: 18368-28367 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371852 5261 Brassicaceae View MSA
123828555 5264 Brassicales-Malvales View MSA
124339581 5266 SBM View MSA
124251680 5268 Malvidae View MSA
124066333 5270 Rosid View MSA
123743617 5271 Pentapetalae View MSA
122787682 5272 Eudicot View MSA
122042328 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain